Warning: Permanently added '3.86.84.82' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7146927-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 0.71 PID: 12417 Logging PID: 12418 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'bootstrap': 'off', 'build_id': 7146927, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'a428362f4ef8ac6a349c94af21d99f670654c435', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.13/COPASI', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'COPASI', 'package_version': '4.42.284-6', 'project_dirname': 'python3.13', 'project_name': 'python3.13', 'project_owner': '@python', 'repo_priority': 9, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/@python/python3.13/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': 9}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': '@python/python3.13--churchyard', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'churchyard', 'tags': [], 'task_id': '7146927-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/@python/python3.13/COPASI /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/@python/python3.13/COPASI', '/var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI'... Running: git checkout a428362f4ef8ac6a349c94af21d99f670654c435 -- cmd: ['git', 'checkout', 'a428362f4ef8ac6a349c94af21d99f670654c435', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI rc: 0 stdout: stderr: Note: switching to 'a428362f4ef8ac6a349c94af21d99f670654c435'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at a428362 automatic import of COPASI Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading COPASI-Build-284.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o COPASI-Build-284.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/@python/python3.13/COPASI/COPASI-Build-284.tar.gz/md5/ef461df70cde8900517de385642ee4ae/COPASI-Build-284.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.1M 100 25.1M 0 0 65.2M 0 --:--:-- --:--:-- --:--:-- 65.1M /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Reading stdout from command: md5sum COPASI-Build-284.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1710333877.360594 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1710333877.360594 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI/COPASI.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1710333877.360594/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.0-1.fc39.noarch python3-dnf-plugins-core-4.5.0-1.fc39.noarch yum-4.19.0-1.fc39.noarch dnf5-5.1.14-1.fc39.x86_64 dnf5-plugins-5.1.14-1.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 225.8 KiB/s | 22.1 KiB | 00m00s Copr repository 100% | 54.9 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 242.6 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 73.3 MiB/s | 4.5 MiB | 00m00s Repositories loaded. 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B popt x86_64 1.19-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.12.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 KiB python-srpm-macros noarch 3.13-5.fc40 copr_base 50.1 KiB qt5-srpm-macros noarch 5.15.12-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 492.0 B qt6-srpm-macros noarch 6.6.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 489.2 KiB rpm x86_64 4.19.1.1-1.fc41 copr_base 3.0 MiB rpm-build-libs x86_64 4.19.1.1-1.fc41 copr_base 198.4 KiB rpm-libs x86_64 4.19.1.1-1.fc41 copr_base 709.9 KiB rpm-sequoia x86_64 1.6.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB rust-srpm-macros noarch 26.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.14.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.4 KiB sqlite-libs x86_64 3.45.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 255.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB util-linux-core x86_64 2.40-0.11.rc1.fc41 copr_base 1.5 MiB xxhash-libs x86_64 0.8.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.5 KiB xz-libs x86_64 5.6.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 248.2 KiB zig-srpm-macros noarch 1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-40.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.0 KiB zstd x86_64 1.5.5-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 52 MiB. Need to download 0 B. After this operation 179 MiB will be used (install 179 MiB, remove 0 B). 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Installing debugedit-0:5.0-14 100% | 197.0 MiB/s | 201.7 KiB | 00m00s [121/155] Installing rpm-build-libs-0:4 100% | 194.6 MiB/s | 199.2 KiB | 00m00s [122/155] Installing curl-0:8.6.0-7.fc4 100% | 65.4 MiB/s | 736.9 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.1.1-1.fc41.x86_64 >>> Stop pre-install scriptlet: rpm-0:4.19.1.1-1.fc41.x86_64 [123/155] Installing rpm-0:4.19.1.1-1.f 100% | 171.2 MiB/s | 2.4 MiB | 00m00s [124/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [125/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [126/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [127/155] Installing tar-2:1.35-3.fc40. 100% | 327.8 MiB/s | 3.0 MiB | 00m00s [128/155] Installing patch-0:2.7.6-24.f 100% | 258.1 MiB/s | 264.3 KiB | 00m00s [129/155] Installing libsemanage-0:3.6- 100% | 144.2 MiB/s | 295.3 KiB | 00m00s [130/155] Installing shadow-utils-2:4.1 100% | 154.5 MiB/s | 4.2 MiB | 00m00s >>> Running pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 >>> Stop pre-install scriptlet: libutempter-0:1.2.1-13.fc40.x86_64 [131/155] Installing libutempter-0:1.2. 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [132/155] Installing pkgconf-m4-0:2.1.0 100% | 0.0 B/s | 14.3 KiB | 00m00s [133/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [134/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [135/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [136/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 768.0 B | 00m00s [137/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [146/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 56.5 KiB | 00m00s [147/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.2 KiB | 00m00s [148/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 61.6 KiB | 00m00s [149/155] Installing python-srpm-macros 100% | 0.0 B/s | 51.3 KiB | 00m00s [150/155] Installing redhat-rpm-config- 100% | 187.2 MiB/s | 191.7 KiB | 00m00s [151/155] Installing rpm-build-0:4.19.1 100% | 88.9 MiB/s | 182.0 KiB | 00m00s [152/155] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [153/155] Installing util-linux-0:2.40- 100% | 169.8 MiB/s | 3.7 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40-0.11.rc1.fc41.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40-0.11.rc1.fc41.x86_64 [154/155] Installing which-0:2.21-41.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [155/155] Installing info-0:7.1-2.fc40. 100% | 447.2 KiB/s | 358.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-8.fc40.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.1.1-1.fc41.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.1.1-1.fc41.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-5.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-5.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 Warning: skipped PGP checks for 153 package(s). Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-14.fc40.noarch audit-libs-4.0.1-1.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-5.fc41.x86_64 binutils-gold-2.42.50-5.fc41.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.4-6.fc40.x86_64 coreutils-common-9.4-6.fc40.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240304-1.git0375239.fc41.noarch curl-8.6.0-7.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.1-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-2.fc41.x86_64 elfutils-debuginfod-client-0.191-2.fc41.x86_64 elfutils-default-yama-scope-0.191-2.fc41.noarch elfutils-libelf-0.191-2.fc41.x86_64 elfutils-libs-0.191-2.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.6.noarch fedora-release-common-41-0.6.noarch fedora-release-identity-basic-41-0.6.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-8.fc40.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.0-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-1.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9-1.fc41.noarch glibc-2.39.9000-5.fc41.x86_64 glibc-common-2.39.9000-5.fc41.x86_64 glibc-gconv-extra-2.39.9000-5.fc41.x86_64 glibc-minimal-langpack-2.39.9000-5.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.5.0-1.fc41.noarch grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc40.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-0.11.rc1.fc41.x86_64 libbrotli-1.1.0-3.fc41.x86_64 libcap-2.69-3.fc40.x86_64 libcap-ng-0.8.4-4.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.6.0-7.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-0.11.rc1.fc41.x86_64 libffi-3.4.4-8.fc41.x86_64 libgcc-14.0.1-0.8.fc41.x86_64 libgomp-14.0.1-0.8.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-0.11.rc1.fc41.x86_64 libnghttp2-1.60.0-2.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc41.x86_64 libselinux-3.6-4.fc41.x86_64 libsemanage-3.6-3.fc41.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-0.11.rc1.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.8.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc2.fc40.2.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-0.11.rc1.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.5-1.fc41.x86_64 libzstd-1.5.5-5.fc40.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.1-3.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.0-2.fc41.x86_64 pam-libs-1.6.0-2.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.42-2.fc40.2.x86_64 pcre2-syntax-10.42-2.fc40.2.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.13-5.fc40.noarch qt5-srpm-macros-5.15.12-3.fc40.noarch qt6-srpm-macros-6.6.2-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-286-1.fc41.noarch rpm-4.19.1.1-1.fc41.x86_64 rpm-build-4.19.1.1-1.fc41.x86_64 rpm-build-libs-4.19.1.1-1.fc41.x86_64 rpm-libs-4.19.1.1-1.fc41.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-1.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.4-1.fc41.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-0.11.rc1.fc41.x86_64 util-linux-core-2.40-0.11.rc1.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.6.1-1.fc41.x86_64 xz-libs-5.6.1-1.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.5-5.fc40.x86_64 Start: buildsrpm Start: rpmbuild -bs sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707004800 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-6.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1710333877.360594/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1710333877.360594/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-s9nv2hxz/COPASI/COPASI.spec) Config(child) 0 minutes 8 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-6.fc41.src.rpm) Config(fedora-rawhide-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1710333877.360594/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.0-1.fc39.noarch python3-dnf-plugins-core-4.5.0-1.fc39.noarch yum-4.19.0-1.fc39.noarch dnf5-5.1.14-1.fc39.x86_64 dnf5-plugins-5.1.14-1.fc39.x86_64 Finish: chroot init Start: build phase for COPASI-4.42.284-6.fc41.src.rpm Start: build setup for COPASI-4.42.284-6.fc41.src.rpm sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707004800 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-6.fc41.src.rpm Updating and loading repositories: Copr repository 100% | 102.5 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 206.2 KiB/s | 4.1 KiB | 00m00s fedora 100% | 171.5 KiB/s | 22.1 KiB | 00m00s Copr repository 100% | 56.8 MiB/s | 4.5 MiB | 00m00s Repositories loaded. Package "pkgconf-pkg-config-2.1.0-1.fc40.x86_64" is already installed. Package Arch Version Repository Size Installing: ImageMagick x86_64 1:7.1.1.26-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 97.6 KiB bison x86_64 3.8.2-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB bzip2-devel x86_64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309.8 KiB cmake x86_64 3.28.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.5 MiB cppunit-devel x86_64 1.15.1-19.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 211.4 KiB crossguid2-devel x86_64 0.2.2-17.20190529gitca1bf4b.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13.3 KiB desktop-file-utils x86_64 0.26-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 226.0 KiB expat-devel x86_64 2.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.6 KiB f2c x86_64 20210928-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB xorg-x11-proto-devel noarch 2023.2-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB xz-devel x86_64 5.6.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 255.7 KiB zipper x86_64 1.0.3-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207.5 KiB zlib-ng-compat-devel x86_64 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103.4 KiB Transaction Summary: Installing: 368 packages Total size of inbound packages is 270 MiB. 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MiB | 00m00s [267/368] jbigkit-libs-0:2.1-29.fc40.x8 100% | 7.4 MiB/s | 53.1 KiB | 00m00s [268/368] libXt-0:1.3.0-3.fc40.x86_64 100% | 34.7 MiB/s | 177.5 KiB | 00m00s [269/368] lcms2-0:2.16-3.fc40.x86_64 100% | 29.3 MiB/s | 180.2 KiB | 00m00s [270/368] libheif-0:1.17.5-4.fc40.x86_6 100% | 38.2 MiB/s | 351.8 KiB | 00m00s [271/368] libgs-0:10.03.0-1.fc41.x86_64 100% | 187.3 MiB/s | 3.4 MiB | 00m00s [272/368] libjxl-1:0.8.2-3.fc40.x86_64 100% | 118.8 MiB/s | 1.2 MiB | 00m00s [273/368] libraqm-0:0.8.0-7.fc40.x86_64 100% | 4.8 MiB/s | 19.8 KiB | 00m00s [274/368] liblqr-1-0:0.4.2-24.fc40.x86_ 100% | 5.3 MiB/s | 48.7 KiB | 00m00s [275/368] librsvg2-0:2.57.1-4.fc40.x86_ 100% | 169.4 MiB/s | 1.5 MiB | 00m00s [276/368] libtiff-0:4.6.0-2.fc40.x86_64 100% | 46.4 MiB/s | 332.4 KiB | 00m00s [277/368] libwmf-lite-0:0.2.13-5.fc40.x 100% | 8.9 MiB/s | 73.1 KiB | 00m00s [278/368] libzip-0:1.10.1-3.fc40.x86_64 100% | 6.6 MiB/s | 67.7 KiB | 00m00s [279/368] openexr-libs-0:3.1.10-5.fc40. 100% | 74.9 MiB/s | 1.1 MiB | 00m00s [280/368] openjpeg2-0:2.5.2-1.fc41.x86_ 100% | 14.0 MiB/s | 186.2 KiB | 00m00s [281/368] vulkan-headers-0:1.3.275.0-1. 100% | 5.0 MiB/s | 1.2 MiB | 00m00s [282/368] gd-0:2.3.3-16.fc41.x86_64 100% | 18.9 MiB/s | 135.8 KiB | 00m00s [283/368] gts-0:0.7.6-48.20121130.fc40. 100% | 38.5 MiB/s | 236.8 KiB | 00m00s [284/368] lasi-0:1.1.3-13.fc40.x86_64 100% | 13.5 MiB/s | 55.4 KiB | 00m00s [285/368] urw-base35-fonts-0:20200910-1 100% | 2.0 MiB/s | 10.0 KiB | 00m00s [286/368] poppler-glib-0:24.02.0-2.fc40 100% | 30.9 MiB/s | 190.0 KiB | 00m00s [287/368] urw-base35-bookman-fonts-0:20 100% | 118.1 MiB/s | 846.9 KiB | 00m00s [288/368] urw-base35-d050000l-fonts-0:2 100% | 14.8 MiB/s | 75.7 KiB | 00m00s [289/368] urw-base35-c059-fonts-0:20200 100% | 85.4 MiB/s | 874.0 KiB | 00m00s [290/368] urw-base35-fonts-common-0:202 100% | 4.1 MiB/s | 20.8 KiB | 00m00s [291/368] urw-base35-gothic-fonts-0:202 100% | 69.7 MiB/s | 642.5 KiB | 00m00s [292/368] urw-base35-nimbus-mono-ps-fon 100% | 97.0 MiB/s | 794.6 KiB | 00m00s [293/368] urw-base35-nimbus-roman-fonts 100% | 83.6 MiB/s | 855.9 KiB | 00m00s [294/368] urw-base35-standard-symbols-p 100% | 8.1 MiB/s | 41.5 KiB | 00m00s [295/368] urw-base35-p052-fonts-0:20200 100% | 105.6 MiB/s | 973.2 KiB | 00m00s [296/368] urw-base35-nimbus-sans-fonts- 100% | 86.7 MiB/s | 1.3 MiB | 00m00s [297/368] urw-base35-z003-fonts-0:20200 100% | 44.8 MiB/s | 275.5 KiB | 00m00s [298/368] gpgmepp-0:1.23.2-3.fc41.x86_6 100% | 67.7 MiB/s | 138.7 KiB | 00m00s [299/368] nspr-0:4.35.0-21.fc41.x86_64 100% | 26.8 MiB/s | 137.4 KiB | 00m00s [300/368] poppler-0:24.02.0-2.fc40.x86_ 100% | 108.4 MiB/s | 1.2 MiB | 00m00s [301/368] nss-0:3.98.0-1.fc41.x86_64 100% | 62.3 MiB/s | 702.2 KiB | 00m00s [302/368] crypto-policies-scripts-0:202 100% | 17.1 MiB/s | 105.0 KiB | 00m00s [303/368] poppler-data-0:0.4.11-7.fc40. 100% | 141.2 MiB/s | 2.0 MiB | 00m00s [304/368] nss-sysinit-0:3.98.0-1.fc41.x 100% | 3.6 MiB/s | 18.6 KiB | 00m00s [305/368] nss-softokn-0:3.98.0-1.fc41.x 100% | 49.9 MiB/s | 408.7 KiB | 00m00s [306/368] nss-util-0:3.98.0-1.fc41.x86_ 100% | 21.6 MiB/s | 88.5 KiB | 00m00s [307/368] cairo-gobject-0:1.18.0-3.fc40 100% | 5.7 MiB/s | 17.5 KiB | 00m00s [308/368] liblerc-0:4.0.0-6.fc40.x86_64 100% | 51.3 MiB/s | 210.1 KiB | 00m00s [309/368] rsvg-pixbuf-loader-0:2.57.1-4 100% | 5.2 MiB/s | 16.1 KiB | 00m00s [310/368] highway-0:1.1.0-1.fc41.x86_64 100% | 96.2 MiB/s | 492.3 KiB | 00m00s [311/368] libdav1d-0:1.4.0-1.fc41.x86_6 100% | 86.5 MiB/s | 619.9 KiB | 00m00s [312/368] libaom-0:3.8.0-3.fc40.x86_64 100% | 141.5 MiB/s | 1.8 MiB | 00m00s [313/368] rav1e-libs-0:0.7.1-1.fc40.x86 100% | 114.4 MiB/s | 1.0 MiB | 00m00s [314/368] svt-av1-libs-0:1.4.1-5.fc40.x 100% | 135.7 MiB/s | 2.0 MiB | 00m00s [315/368] adobe-mappings-cmap-deprecate 100% | 10.1 MiB/s | 114.0 KiB | 00m00s [316/368] adobe-mappings-cmap-0:2023062 100% | 140.0 MiB/s | 2.1 MiB | 00m00s [317/368] jbig2dec-libs-0:0.20-4.fc40.x 100% | 18.0 MiB/s | 73.8 KiB | 00m00s [318/368] adobe-mappings-pdf-0:20190401 100% | 67.1 MiB/s | 687.0 KiB | 00m00s [319/368] libijs-0:0.35-22.fc40.x86_64 100% | 7.2 MiB/s | 29.3 KiB | 00m00s [320/368] google-droid-sans-fonts-0:202 100% | 159.0 MiB/s | 2.7 MiB | 00m00s [321/368] libpaper-1:2.1.1-3.fc40.x86_6 100% | 3.3 MiB/s | 26.8 KiB | 00m00s [322/368] libvmaf-0:2.3.0-7.fc40.x86_64 100% | 22.0 MiB/s | 180.1 KiB | 00m00s [323/368] netpbm-0:11.02.00-6.fc40.x86_ 100% | 36.1 MiB/s | 184.9 KiB | 00m00s [324/368] libXpm-0:3.5.17-3.fc40.x86_64 100% | 16.0 MiB/s | 65.7 KiB | 00m00s [325/368] libavif-0:1.0.4-1.fc41.x86_64 100% | 22.2 MiB/s | 90.8 KiB | 00m00s [326/368] libimagequant-0:4.0.3-3.fc40. 100% | 59.7 MiB/s | 305.6 KiB | 00m00s [327/368] jasper-libs-0:4.2.1-1.fc41.x8 100% | 22.5 MiB/s | 161.6 KiB | 00m00s [328/368] gpgme-0:1.23.2-3.fc41.x86_64 100% | 103.3 MiB/s | 211.5 KiB | 00m00s [329/368] libassuan-0:2.5.7-1.fc41.x86_ 100% | 9.3 MiB/s | 66.8 KiB | 00m00s [330/368] openblas-openmp64-0:0.3.26-4. 100% | 159.4 MiB/s | 4.9 MiB | 00m00s [331/368] openblas-openmp-0:0.3.26-4.fc 100% | 136.8 MiB/s | 5.1 MiB | 00m00s [332/368] openblas-0:0.3.26-4.fc40.x86_ 100% | 5.4 MiB/s | 38.6 KiB | 00m00s [333/368] nss-softokn-freebl-0:3.98.0-1 100% | 58.8 MiB/s | 361.5 KiB | 00m00s [334/368] libgcrypt-0:1.10.3-3.fc40.x86 100% | 70.3 MiB/s | 504.1 KiB | 00m00s [335/368] gnupg2-0:2.4.5-1.fc41.x86_64 100% | 115.4 MiB/s | 2.7 MiB | 00m00s [336/368] npth-0:1.7-1.fc41.x86_64 100% | 4.9 MiB/s | 24.9 KiB | 00m00s [337/368] libksba-0:1.6.6-1.fc41.x86_64 100% | 25.8 MiB/s | 158.7 KiB | 00m00s [338/368] tpm2-tss-0:4.0.1-7.fc40.x86_6 100% | 76.4 MiB/s | 391.1 KiB | 00m00s [339/368] json-c-0:0.17-3.fc40.x86_64 100% | 14.3 MiB/s | 44.0 KiB | 00m00s [340/368] perl-Pod-Usage-4:2.03-503.fc4 100% | 7.8 MiB/s | 39.7 KiB | 00m00s [341/368] perl-Pod-Perldoc-0:3.28.01-50 100% | 19.4 MiB/s | 79.4 KiB | 00m00s [342/368] perl-podlators-1:5.01-502.fc4 100% | 19.7 MiB/s | 120.9 KiB | 00m00s [343/368] perl-File-Temp-1:0.231.100-50 100% | 14.4 MiB/s | 59.0 KiB | 00m00s [344/368] groff-base-0:1.23.0-6.fc40.x8 100% | 118.9 MiB/s | 1.1 MiB | 00m00s [345/368] perl-HTTP-Tiny-0:0.088-5.fc40 100% | 10.9 MiB/s | 55.6 KiB | 00m00s [346/368] perl-IPC-Open3-0:1.22-506.fc4 100% | 5.4 MiB/s | 22.3 KiB | 00m00s [347/368] perl-POSIX-0:2.13-506.fc40.x8 100% | 23.7 MiB/s | 96.9 KiB | 00m00s [348/368] perl-Pod-Simple-1:3.45-6.fc40 100% | 40.7 MiB/s | 208.6 KiB | 00m00s [349/368] perl-IO-Socket-SSL-0:2.085-1. 100% | 27.4 MiB/s | 224.5 KiB | 00m00s [350/368] perl-Mozilla-CA-0:20231213-3. 100% | 3.4 MiB/s | 13.9 KiB | 00m00s [351/368] perl-Time-Local-2:1.350-5.fc4 100% | 11.2 MiB/s | 34.3 KiB | 00m00s [352/368] perl-Term-ANSIColor-0:5.01-50 100% | 15.5 MiB/s | 47.6 KiB | 00m00s [353/368] perl-Net-SSLeay-0:1.94-3.fc40 100% | 44.7 MiB/s | 366.3 KiB | 00m00s [354/368] perl-Term-Cap-0:1.18-503.fc40 100% | 7.1 MiB/s | 21.9 KiB | 00m00s [355/368] perl-Pod-Escapes-1:1.07-503.f 100% | 6.4 MiB/s | 19.6 KiB | 00m00s [356/368] ncurses-0:6.4-12.20240127.fc4 100% | 58.0 MiB/s | 416.0 KiB | 00m00s [357/368] perl-Text-Tabs+Wrap-0:2024.00 100% | 7.0 MiB/s | 21.6 KiB | 00m00s [358/368] perl-if-0:0.61.000-506.fc40.n 100% | 2.3 MiB/s | 14.4 KiB | 00m00s [359/368] perl-locale-0:1.10-506.fc40.n 100% | 3.4 MiB/s | 14.1 KiB | 00m00s [360/368] perl-AutoLoader-0:5.74-506.fc 100% | 5.3 MiB/s | 21.7 KiB | 00m00s [361/368] perl-IO-Socket-IP-0:0.42-2.fc 100% | 13.6 MiB/s | 41.7 KiB | 00m00s [362/368] perl-URI-0:5.27-1.fc40.noarch 100% | 29.1 MiB/s | 119.4 KiB | 00m00s [363/368] perl-Data-Dumper-0:2.188-503. 100% | 9.1 MiB/s | 56.0 KiB | 00m00s [364/368] perl-libnet-0:3.15-503.fc40.n 100% | 29.9 MiB/s | 122.5 KiB | 00m00s [365/368] perl-B-0:1.88-506.fc40.x86_64 100% | 34.4 MiB/s | 176.3 KiB | 00m00s [366/368] perl-Digest-MD5-0:2.59-3.fc40 100% | 11.6 MiB/s | 35.8 KiB | 00m00s [367/368] perl-FileHandle-0:2.05-506.fc 100% | 5.2 MiB/s | 15.9 KiB | 00m00s [368/368] perl-Digest-0:1.20-502.fc40.n 100% | 4.8 MiB/s | 24.6 KiB | 00m00s -------------------------------------------------------------------------------- [368/368] Total 100% | 156.6 MiB/s | 257.2 MiB | 00m02s Running transaction [ 1/370] Verify package files 100% | 472.0 B/s | 368.0 B | 00m01s [ 2/370] Prepare transaction 100% | 2.5 KiB/s | 368.0 B | 00m00s [ 3/370] Installing cmake-filesystem-0 100% | 7.0 MiB/s | 7.1 KiB | 00m00s [ 4/370] Installing libpng-2:1.6.40-3. 100% | 237.4 MiB/s | 243.1 KiB | 00m00s [ 5/370] Installing libjpeg-turbo-0:3. 100% | 380.2 MiB/s | 778.6 KiB | 00m00s [ 6/370] Installing libwebp-0:1.3.2-5. 100% | 259.7 MiB/s | 797.7 KiB | 00m00s [ 7/370] Installing expat-0:2.6.0-1.fc 100% | 272.4 MiB/s | 278.9 KiB | 00m00s [ 8/370] Installing nspr-0:4.35.0-21.f 100% | 307.0 MiB/s | 314.4 KiB | 00m00s [ 9/370] Installing libgpg-error-0:1.4 100% | 286.6 MiB/s | 880.3 KiB | 00m00s [ 10/370] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 11/370] Installing urw-base35-fonts-c 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 12/370] Installing libglvnd-1:1.7.0-4 100% | 519.2 MiB/s | 531.7 KiB | 00m00s [ 13/370] Installing libX11-xcb-0:1.8.7 100% | 0.0 B/s | 15.9 KiB | 00m00s [ 14/370] Installing libglvnd-opengl-1: 100% | 146.2 MiB/s | 149.7 KiB | 00m00s [ 15/370] Installing nss-util-0:3.98.0- 100% | 221.8 MiB/s | 227.1 KiB | 00m00s [ 16/370] Installing openjpeg2-0:2.5.2- 100% | 216.6 MiB/s | 443.6 KiB | 00m00s [ 17/370] Installing lcms2-0:2.16-3.fc4 100% | 206.3 MiB/s | 422.5 KiB | 00m00s [ 18/370] Installing libgfortran-0:14.0 100% | 367.8 MiB/s | 2.9 MiB | 00m00s [ 19/370] Installing libICE-0:1.1.1-3.f 100% | 178.3 MiB/s | 182.6 KiB | 00m00s [ 20/370] Installing libSM-0:1.2.4-3.fc 100% | 0.0 B/s | 98.6 KiB | 00m00s [ 21/370] Installing libassuan-0:2.5.7- 100% | 161.7 MiB/s | 165.6 KiB | 00m00s [ 22/370] Installing libmpc-0:1.3.1-5.f 100% | 162.3 MiB/s | 166.2 KiB | 00m00s [ 23/370] Installing libogg-2:1.3.5-8.f 100% | 0.0 B/s | 51.0 KiB | 00m00s [ 24/370] Installing libwayland-client- 100% | 0.0 B/s | 59.3 KiB | 00m00s [ 25/370] Installing mesa-libglapi-0:24 100% | 165.4 MiB/s | 169.3 KiB | 00m00s [ 26/370] Installing libicu-0:74.2-1.fc 100% | 411.1 MiB/s | 34.9 MiB | 00m00s [ 27/370] Installing libxslt-0:1.1.39-3 100% | 236.7 MiB/s | 484.7 KiB | 00m00s [ 28/370] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 29/370] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 30/370] Installing mesa-libGLU-0:9.0. 100% | 346.3 MiB/s | 354.6 KiB | 00m00s [ 31/370] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s [ 32/370] Installing adobe-mappings-cma 100% | 411.9 MiB/s | 14.4 MiB | 00m00s [ 33/370] Installing svt-av1-libs-0:1.4 100% | 421.9 MiB/s | 7.2 MiB | 00m00s [ 34/370] Installing rav1e-libs-0:0.7.1 100% | 378.7 MiB/s | 3.0 MiB | 00m00s [ 35/370] Installing libdav1d-0:1.4.0-1 100% | 415.5 MiB/s | 1.7 MiB | 00m00s [ 36/370] Installing jbigkit-libs-0:2.1 100% | 116.8 MiB/s | 119.6 KiB | 00m00s [ 37/370] Installing imath-0:3.1.10-1.f 100% | 179.2 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urw-base35-c059-fonts-0:20200910-19.fc40.no >>> Running post-transaction scriptlet: urw-base35-d050000l-fonts-0:20200910-19. >>> Stop post-transaction scriptlet: urw-base35-d050000l-fonts-0:20200910-19.fc4 >>> Running post-transaction scriptlet: urw-base35-gothic-fonts-0:20200910-19.fc >>> Stop post-transaction scriptlet: urw-base35-gothic-fonts-0:20200910-19.fc40. >>> Running post-transaction scriptlet: urw-base35-nimbus-mono-ps-fonts-0:202009 >>> Stop post-transaction scriptlet: urw-base35-nimbus-mono-ps-fonts-0:20200910- >>> Running post-transaction scriptlet: urw-base35-nimbus-roman-fonts-0:20200910 >>> Stop post-transaction scriptlet: urw-base35-nimbus-roman-fonts-0:20200910-19 >>> Running post-transaction scriptlet: urw-base35-nimbus-sans-fonts-0:20200910- >>> Stop post-transaction scriptlet: urw-base35-nimbus-sans-fonts-0:20200910-19. >>> Running post-transaction scriptlet: urw-base35-p052-fonts-0:20200910-19.fc40 >>> Stop post-transaction scriptlet: urw-base35-p052-fonts-0:20200910-19.fc40.no >>> Running post-transaction scriptlet: urw-base35-standard-symbols-ps-fonts-0:2 >>> Stop post-transaction scriptlet: urw-base35-standard-symbols-ps-fonts-0:2020 >>> Running post-transaction scriptlet: urw-base35-z003-fonts-0:20200910-19.fc40 >>> Stop post-transaction scriptlet: urw-base35-z003-fonts-0:20200910-19.fc40.no >>> Running post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Stop post-transaction scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Running post-transaction scriptlet: crypto-policies-scripts-0:20240304-1.git >>> Stop post-transaction scriptlet: crypto-policies-scripts-0:20240304-1.git037 >>> Running post-transaction scriptlet: nss-0:3.98.0-1.fc41.x86_64 >>> Stop post-transaction scriptlet: nss-0:3.98.0-1.fc41.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-5.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-5.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.x86_64 >>> Running trigger-install scriptlet: glib2-0:2.79.1-1.fc40.x86_64 >>> Stop trigger-install scriptlet: glib2-0:2.79.1-1.fc40.x86_64 >>> Running trigger-install scriptlet: shared-mime-info-0:2.3-4.fc41.x86_64 >>> Stop trigger-install scriptlet: shared-mime-info-0:2.3-4.fc41.x86_64 >>> Running trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-8.fc40.x86_64 >>> Stop trigger-install scriptlet: gdk-pixbuf2-0:2.42.10-8.fc40.x86_64 >>> Running trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Stop trigger-install scriptlet: fontconfig-0:2.15.0-4.fc40.x86_64 >>> Running trigger-install scriptlet: graphviz-0:10.0.1-1.fc41.x86_64 >>> Stop trigger-install scriptlet: graphviz-0:10.0.1-1.fc41.x86_64 >>> Running trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 >>> Stop trigger-install scriptlet: desktop-file-utils-0:0.26-12.fc40.x86_64 Warning: skipped PGP checks for 368 package(s). Finish: build setup for COPASI-4.42.284-6.fc41.src.rpm Start: rpmbuild COPASI-4.42.284-6.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1707004800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.NNS4Ei + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf COPASI-Build-284 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/COPASI-Build-284.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd COPASI-Build-284 + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -f license.txt ++ find copasi -type f '(' -name '*.cpp' ')' + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + touch -r copasi/xml/parser/UnsupportedAnnotationHandler.cpp copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new + mv copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + touch -r copasi/xml/parser/UnitDefinitionHandler.cpp copasi/xml/parser/UnitDefinitionHandler.cpp.new + mv copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + touch -r copasi/xml/parser/UNKNOWNHandler.cpp copasi/xml/parser/UNKNOWNHandler.cpp.new + mv copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + touch -r copasi/xml/parser/TextGlyphHandler.cpp copasi/xml/parser/TextGlyphHandler.cpp.new + mv copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + touch -r copasi/xml/parser/TaskHandler.cpp copasi/xml/parser/TaskHandler.cpp.new + mv copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + touch -r copasi/xml/parser/TableHandler.cpp copasi/xml/parser/TableHandler.cpp.new + mv copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + touch -r copasi/xml/parser/SubstrateHandler.cpp copasi/xml/parser/SubstrateHandler.cpp.new + mv copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + touch -r copasi/xml/parser/StyleHandler.cpp copasi/xml/parser/StyleHandler.cpp.new + mv copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + touch -r copasi/xml/parser/StateTemplateVariableHandler.cpp copasi/xml/parser/StateTemplateVariableHandler.cpp.new + mv copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + touch -r copasi/xml/parser/StateTemplateHandler.cpp copasi/xml/parser/StateTemplateHandler.cpp.new + mv copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + touch -r copasi/xml/parser/SourceParameterHandler.cpp copasi/xml/parser/SourceParameterHandler.cpp.new + mv copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + touch -r copasi/xml/parser/SliderHandler.cpp copasi/xml/parser/SliderHandler.cpp.new + mv copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + touch -r copasi/xml/parser/SBMLMapHandler.cpp copasi/xml/parser/SBMLMapHandler.cpp.new + mv copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + touch -r copasi/xml/parser/ReportTargetHandler.cpp copasi/xml/parser/ReportTargetHandler.cpp.new + mv copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + touch -r copasi/xml/parser/ReportSectionHandler.cpp copasi/xml/parser/ReportSectionHandler.cpp.new + mv copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + touch -r copasi/xml/parser/ReportDefinitionHandler.cpp copasi/xml/parser/ReportDefinitionHandler.cpp.new + mv copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + touch -r copasi/xml/parser/RenderTextHandler.cpp copasi/xml/parser/RenderTextHandler.cpp.new + mv copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + touch -r copasi/xml/parser/RenderInformationHandler.cpp copasi/xml/parser/RenderInformationHandler.cpp.new + mv copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + touch -r copasi/xml/parser/RenderCurveHandler.cpp copasi/xml/parser/RenderCurveHandler.cpp.new + mv copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + touch -r copasi/xml/parser/RenderCurveElementHandler.cpp copasi/xml/parser/RenderCurveElementHandler.cpp.new + mv copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + touch -r copasi/xml/parser/RectangleHandler.cpp copasi/xml/parser/RectangleHandler.cpp.new + mv copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + touch -r copasi/xml/parser/ReactionHandler.cpp copasi/xml/parser/ReactionHandler.cpp.new + mv copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + touch -r copasi/xml/parser/ReactionGlyphHandler.cpp copasi/xml/parser/ReactionGlyphHandler.cpp.new + mv copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + touch -r copasi/xml/parser/RadialGradientHandler.cpp copasi/xml/parser/RadialGradientHandler.cpp.new + mv copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + touch -r copasi/xml/parser/ProductHandler.cpp copasi/xml/parser/ProductHandler.cpp.new + mv copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + touch -r copasi/xml/parser/PolygonHandler.cpp copasi/xml/parser/PolygonHandler.cpp.new + mv copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + touch -r copasi/xml/parser/PointHandler.cpp copasi/xml/parser/PointHandler.cpp.new + mv copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + touch -r copasi/xml/parser/PlotSpecificationHandler.cpp copasi/xml/parser/PlotSpecificationHandler.cpp.new + mv copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + touch -r copasi/xml/parser/PlotItemHandler.cpp copasi/xml/parser/PlotItemHandler.cpp.new + mv copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + touch -r copasi/xml/parser/ParameterTextHandler.cpp copasi/xml/parser/ParameterTextHandler.cpp.new + mv copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + touch -r copasi/xml/parser/ParameterHandler.cpp copasi/xml/parser/ParameterHandler.cpp.new + mv copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + touch -r copasi/xml/parser/ParameterGroupHandler.cpp copasi/xml/parser/ParameterGroupHandler.cpp.new + mv copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + touch -r copasi/xml/parser/ParameterDescriptionHandler.cpp copasi/xml/parser/ParameterDescriptionHandler.cpp.new + mv copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + touch -r copasi/xml/parser/ObjectHandler.cpp copasi/xml/parser/ObjectHandler.cpp.new + mv copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + touch -r copasi/xml/parser/ModifierHandler.cpp copasi/xml/parser/ModifierHandler.cpp.new + mv copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + touch -r copasi/xml/parser/ModelValueHandler.cpp copasi/xml/parser/ModelValueHandler.cpp.new + mv copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + touch -r copasi/xml/parser/ModelParameterSetHandler.cpp copasi/xml/parser/ModelParameterSetHandler.cpp.new + mv copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + touch -r copasi/xml/parser/ModelParameterHandler.cpp copasi/xml/parser/ModelParameterHandler.cpp.new + mv copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + touch -r copasi/xml/parser/ModelParameterGroupHandler.cpp copasi/xml/parser/ModelParameterGroupHandler.cpp.new + mv copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + touch -r copasi/xml/parser/ModelHandler.cpp copasi/xml/parser/ModelHandler.cpp.new + mv copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + touch -r copasi/xml/parser/MiriamAnnotationHandler.cpp copasi/xml/parser/MiriamAnnotationHandler.cpp.new + mv copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + touch -r copasi/xml/parser/MethodHandler.cpp copasi/xml/parser/MethodHandler.cpp.new + mv copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + touch -r copasi/xml/parser/MetaboliteHandler.cpp copasi/xml/parser/MetaboliteHandler.cpp.new + mv copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteGlyphHandler.cpp copasi/xml/parser/MetaboliteGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + touch -r copasi/xml/parser/MathMLHandler.cpp copasi/xml/parser/MathMLHandler.cpp.new + mv copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + touch -r copasi/xml/parser/ListOfLayoutsHandler.cpp copasi/xml/parser/ListOfLayoutsHandler.cpp.new + mv copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + touch -r copasi/xml/parser/ListOfHandler.cpp copasi/xml/parser/ListOfHandler.cpp.new + mv copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + touch -r copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new + mv copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + touch -r copasi/xml/parser/ListOfCurveSegmentsHandler.cpp copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new + mv copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + touch -r copasi/xml/parser/LinearGradientHandler.cpp copasi/xml/parser/LinearGradientHandler.cpp.new + mv copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + touch -r copasi/xml/parser/LineSegmentHandler.cpp copasi/xml/parser/LineSegmentHandler.cpp.new + mv copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + touch -r copasi/xml/parser/LineEndingHandler.cpp copasi/xml/parser/LineEndingHandler.cpp.new + mv copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + touch -r copasi/xml/parser/LayoutHandler.cpp copasi/xml/parser/LayoutHandler.cpp.new + mv copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + touch -r copasi/xml/parser/KineticLawHandler.cpp copasi/xml/parser/KineticLawHandler.cpp.new + mv copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + touch -r copasi/xml/parser/InitialStateHandler.cpp copasi/xml/parser/InitialStateHandler.cpp.new + mv copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + touch -r copasi/xml/parser/ImageHandler.cpp copasi/xml/parser/ImageHandler.cpp.new + mv copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + touch -r copasi/xml/parser/GroupHandler.cpp copasi/xml/parser/GroupHandler.cpp.new + mv copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + touch -r copasi/xml/parser/GradientStopHandler.cpp copasi/xml/parser/GradientStopHandler.cpp.new + mv copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + touch -r copasi/xml/parser/GUIHandler.cpp copasi/xml/parser/GUIHandler.cpp.new + mv copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + touch -r copasi/xml/parser/FunctionHandler.cpp copasi/xml/parser/FunctionHandler.cpp.new + mv copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + touch -r copasi/xml/parser/EventHandler.cpp copasi/xml/parser/EventHandler.cpp.new + mv copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + touch -r copasi/xml/parser/EllipseHandler.cpp copasi/xml/parser/EllipseHandler.cpp.new + mv copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + touch -r copasi/xml/parser/DimensionsHandler.cpp copasi/xml/parser/DimensionsHandler.cpp.new + mv copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + touch -r copasi/xml/parser/CurveHandler.cpp copasi/xml/parser/CurveHandler.cpp.new + mv copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + touch -r copasi/xml/parser/CubicBezierHandler.cpp copasi/xml/parser/CubicBezierHandler.cpp.new + mv copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + touch -r copasi/xml/parser/ConstantHandler.cpp copasi/xml/parser/ConstantHandler.cpp.new + mv copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + touch -r copasi/xml/parser/CompartmentHandler.cpp copasi/xml/parser/CompartmentHandler.cpp.new + mv copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + touch -r copasi/xml/parser/CompartmentGlyphHandler.cpp copasi/xml/parser/CompartmentGlyphHandler.cpp.new + mv copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + touch -r copasi/xml/parser/CommentHandler.cpp copasi/xml/parser/CommentHandler.cpp.new + mv copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + touch -r copasi/xml/parser/ColorDefinitionHandler.cpp copasi/xml/parser/ColorDefinitionHandler.cpp.new + mv copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + touch -r copasi/xml/parser/CharacterDataHandler.cpp copasi/xml/parser/CharacterDataHandler.cpp.new + mv copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + touch -r copasi/xml/parser/ChannelSpecHandler.cpp copasi/xml/parser/ChannelSpecHandler.cpp.new + mv copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + touch -r copasi/xml/parser/CallParameterHandler.cpp copasi/xml/parser/CallParameterHandler.cpp.new + mv copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + touch -r copasi/xml/parser/CXMLParserData.cpp copasi/xml/parser/CXMLParserData.cpp.new + mv copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + touch -r copasi/xml/parser/CXMLParser.cpp copasi/xml/parser/CXMLParser.cpp.new + mv copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + touch -r copasi/xml/parser/CXMLHandlerFactory.cpp copasi/xml/parser/CXMLHandlerFactory.cpp.new + mv copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + touch -r copasi/xml/parser/CXMLHandler.cpp copasi/xml/parser/CXMLHandler.cpp.new + mv copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + touch -r copasi/xml/parser/COPASIHandler.cpp copasi/xml/parser/COPASIHandler.cpp.new + mv copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + touch -r copasi/xml/parser/BoundingBoxHandler.cpp copasi/xml/parser/BoundingBoxHandler.cpp.new + mv copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + touch -r copasi/xml/parser/AssignmentHandler.cpp copasi/xml/parser/AssignmentHandler.cpp.new + mv copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + touch -r copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new + mv copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + touch -r copasi/xml/CFixLocalReactionParameters.cpp copasi/xml/CFixLocalReactionParameters.cpp.new + mv copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + touch -r copasi/xml/CExpat.cpp copasi/xml/CExpat.cpp.new + mv copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + touch -r copasi/xml/CCopasiXMLInterface.cpp copasi/xml/CCopasiXMLInterface.cpp.new + mv copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + touch -r copasi/xml/CCopasiXML.cpp copasi/xml/CCopasiXML.cpp.new + mv copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + touch -r copasi/wizard/wizard.cpp copasi/wizard/wizard.cpp.new + mv copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + touch -r copasi/versioningUI/CQModelVersionHierarchyDM.cpp copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new + mv copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + touch -r copasi/versioningUI/CCreateModelVersionDialog.cpp copasi/versioningUI/CCreateModelVersionDialog.cpp.new + mv copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + touch -r copasi/versioningUI/CBrowseModelVersionDialog.cpp copasi/versioningUI/CBrowseModelVersionDialog.cpp.new + mv copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + touch -r copasi/versioning/CVCard.cpp copasi/versioning/CVCard.cpp.new + mv copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + touch -r copasi/versioning/CModelVersionHierarchy.cpp copasi/versioning/CModelVersionHierarchy.cpp.new + mv copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + touch -r copasi/versioning/CModelVersion.cpp copasi/versioning/CModelVersion.cpp.new + mv copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + touch -r copasi/utilities/utility.cpp copasi/utilities/utility.cpp.new + mv copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + touch -r copasi/utilities/dgemm.cpp copasi/utilities/dgemm.cpp.new + mv copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + touch -r copasi/utilities/CopasiTime.cpp copasi/utilities/CopasiTime.cpp.new + mv copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + touch -r copasi/utilities/Cmd5.cpp copasi/utilities/Cmd5.cpp.new + mv copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + touch -r copasi/utilities/CluX.cpp copasi/utilities/CluX.cpp.new + mv copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + touch -r copasi/utilities/CVersion.cpp copasi/utilities/CVersion.cpp.new + mv copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + touch -r copasi/utilities/CValidity.cpp copasi/utilities/CValidity.cpp.new + mv copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + touch -r copasi/utilities/CValidatedUnit.cpp copasi/utilities/CValidatedUnit.cpp.new + mv copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + touch -r copasi/utilities/CUnitValidator.cpp copasi/utilities/CUnitValidator.cpp.new + mv copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + touch -r copasi/utilities/CUnitParser_yacc.cpp copasi/utilities/CUnitParser_yacc.cpp.new + mv copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + touch -r copasi/utilities/CUnitParser_lex.cpp copasi/utilities/CUnitParser_lex.cpp.new + mv copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + touch -r copasi/utilities/CUnitParser.cpp copasi/utilities/CUnitParser.cpp.new + mv copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + touch -r copasi/utilities/CUnitDefinitionDB.cpp copasi/utilities/CUnitDefinitionDB.cpp.new + mv copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + touch -r copasi/utilities/CUnitDefinition.cpp copasi/utilities/CUnitDefinition.cpp.new + mv copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + touch -r copasi/utilities/CUnitComponent.cpp copasi/utilities/CUnitComponent.cpp.new + mv copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + touch -r copasi/utilities/CUnit.cpp copasi/utilities/CUnit.cpp.new + mv copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + touch -r copasi/utilities/CTaskFactory.cpp copasi/utilities/CTaskFactory.cpp.new + mv copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + touch -r copasi/utilities/CTaskEnum.cpp copasi/utilities/CTaskEnum.cpp.new + mv copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + touch -r copasi/utilities/CTableCell.cpp copasi/utilities/CTableCell.cpp.new + mv copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + touch -r copasi/utilities/CSparseMatrix.cpp copasi/utilities/CSparseMatrix.cpp.new + mv copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + touch -r copasi/utilities/CSlider.cpp copasi/utilities/CSlider.cpp.new + mv copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + touch -r copasi/utilities/CReadConfig.cpp copasi/utilities/CReadConfig.cpp.new + mv copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + touch -r copasi/utilities/CProcessReport.cpp copasi/utilities/CProcessReport.cpp.new + mv copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + touch -r copasi/utilities/CProblemFactory.cpp copasi/utilities/CProblemFactory.cpp.new + mv copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + touch -r copasi/utilities/CParameterEstimationUtils.cpp copasi/utilities/CParameterEstimationUtils.cpp.new + mv copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + touch -r copasi/utilities/CMethodFactory.cpp copasi/utilities/CMethodFactory.cpp.new + mv copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + touch -r copasi/utilities/CLinkMatrix.cpp copasi/utilities/CLinkMatrix.cpp.new + mv copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + touch -r copasi/utilities/CLeastSquareSolution.cpp copasi/utilities/CLeastSquareSolution.cpp.new + mv copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + touch -r copasi/utilities/CIndexedPriorityQueue.cpp copasi/utilities/CIndexedPriorityQueue.cpp.new + mv copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + touch -r copasi/utilities/CExpressionGenerator.cpp copasi/utilities/CExpressionGenerator.cpp.new + mv copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + touch -r copasi/utilities/CDirEntry.cpp copasi/utilities/CDirEntry.cpp.new + mv copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + touch -r copasi/utilities/CDependencyGraph.cpp copasi/utilities/CDependencyGraph.cpp.new + mv copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + touch -r copasi/utilities/CCopasiTaskStatus.cpp copasi/utilities/CCopasiTaskStatus.cpp.new + mv copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + touch -r copasi/utilities/CCopasiTask.cpp copasi/utilities/CCopasiTask.cpp.new + mv copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + touch -r copasi/utilities/CCopasiProblem.cpp copasi/utilities/CCopasiProblem.cpp.new + mv copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + touch -r copasi/utilities/CCopasiParameterGroup.cpp copasi/utilities/CCopasiParameterGroup.cpp.new + mv copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + touch -r copasi/utilities/CCopasiParameter.cpp copasi/utilities/CCopasiParameter.cpp.new + mv copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + touch -r copasi/utilities/CCopasiMethod.cpp copasi/utilities/CCopasiMethod.cpp.new + mv copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + touch -r copasi/utilities/CCopasiMessage.cpp copasi/utilities/CCopasiMessage.cpp.new + mv copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + touch -r copasi/utilities/CCopasiException.cpp copasi/utilities/CCopasiException.cpp.new + mv copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + touch -r copasi/utilities/CBrent.cpp copasi/utilities/CBrent.cpp.new + mv copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + touch -r copasi/utilities/CBaseUnit.cpp copasi/utilities/CBaseUnit.cpp.new + mv copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + touch -r copasi/undoUI/CQUndoDialog.cpp copasi/undoUI/CQUndoDialog.cpp.new + mv copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + touch -r copasi/undoUI/CQUndoDM.cpp copasi/undoUI/CQUndoDM.cpp.new + mv copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + touch -r copasi/undo/CUndoStack.cpp copasi/undo/CUndoStack.cpp.new + mv copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + touch -r copasi/undo/CUndoObjectInterface.cpp copasi/undo/CUndoObjectInterface.cpp.new + mv copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + touch -r copasi/undo/CUndoData.cpp copasi/undo/CUndoData.cpp.new + mv copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + touch -r copasi/undo/CDataValue.cpp copasi/undo/CDataValue.cpp.new + mv copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CData.cpp.new copasi/undo/CData.cpp + touch -r copasi/undo/CData.cpp copasi/undo/CData.cpp.new + mv copasi/undo/CData.cpp.new copasi/undo/CData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + touch -r copasi/tssanalysis/CTSSATask.cpp copasi/tssanalysis/CTSSATask.cpp.new + mv copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + touch -r copasi/tssanalysis/CTSSAProblem.cpp copasi/tssanalysis/CTSSAProblem.cpp.new + mv copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + touch -r copasi/tssanalysis/CTSSAMethod.cpp copasi/tssanalysis/CTSSAMethod.cpp.new + mv copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + touch -r copasi/tssanalysis/CILDMModifiedMethod.cpp copasi/tssanalysis/CILDMModifiedMethod.cpp.new + mv copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + touch -r copasi/tssanalysis/CILDMMethod.cpp copasi/tssanalysis/CILDMMethod.cpp.new + mv copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + touch -r copasi/tssanalysis/CCSPMethod.cpp copasi/tssanalysis/CCSPMethod.cpp.new + mv copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + touch -r copasi/tss/CODEExporterXPPAUT.cpp copasi/tss/CODEExporterXPPAUT.cpp.new + mv copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + touch -r copasi/tss/CODEExporterC.cpp copasi/tss/CODEExporterC.cpp.new + mv copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + touch -r copasi/tss/CODEExporterBM.cpp copasi/tss/CODEExporterBM.cpp.new + mv copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + touch -r copasi/tss/CODEExporter.cpp copasi/tss/CODEExporter.cpp.new + mv copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + touch -r copasi/trajectory/CTrajectoryTask.cpp copasi/trajectory/CTrajectoryTask.cpp.new + mv copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + touch -r copasi/trajectory/CTrajectoryProblem.cpp copasi/trajectory/CTrajectoryProblem.cpp.new + mv copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + touch -r copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new + mv copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + touch -r copasi/trajectory/CTrajectoryMethod.cpp copasi/trajectory/CTrajectoryMethod.cpp.new + mv copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + touch -r copasi/trajectory/CTrajAdaptiveSA.cpp copasi/trajectory/CTrajAdaptiveSA.cpp.new + mv copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + touch -r copasi/trajectory/CTimeSeries.cpp copasi/trajectory/CTimeSeries.cpp.new + mv copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + touch -r copasi/trajectory/CTauLeapMethod.cpp copasi/trajectory/CTauLeapMethod.cpp.new + mv copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + touch -r copasi/trajectory/CStochasticRungeKuttaRI5.cpp copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new + mv copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + touch -r copasi/trajectory/CStochNextReactionMethod.cpp copasi/trajectory/CStochNextReactionMethod.cpp.new + mv copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + touch -r copasi/trajectory/CStochMethod.cpp copasi/trajectory/CStochMethod.cpp.new + mv copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + touch -r copasi/trajectory/CStochDirectMethod.cpp copasi/trajectory/CStochDirectMethod.cpp.new + mv copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + touch -r copasi/trajectory/CRungeKutta.cpp copasi/trajectory/CRungeKutta.cpp.new + mv copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + touch -r copasi/trajectory/CRootFinder.cpp copasi/trajectory/CRootFinder.cpp.new + mv copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + touch -r copasi/trajectory/CRadau5Method.cpp copasi/trajectory/CRadau5Method.cpp.new + mv copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + touch -r copasi/trajectory/CLsodaMethod2.cpp copasi/trajectory/CLsodaMethod2.cpp.new + mv copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + touch -r copasi/trajectory/CLsodaMethod.cpp copasi/trajectory/CLsodaMethod.cpp.new + mv copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionRKMethod.cpp copasi/trajectory/CHybridNextReactionRKMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionLSODAMethod.cpp copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + touch -r copasi/trajectory/CHybridMethodODE45.cpp copasi/trajectory/CHybridMethodODE45.cpp.new + mv copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + touch -r copasi/trajectory/CHybridMethod.cpp copasi/trajectory/CHybridMethod.cpp.new + mv copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + touch -r copasi/timesens/CTimeSensTask.cpp copasi/timesens/CTimeSensTask.cpp.new + mv copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + touch -r copasi/timesens/CTimeSensProblem.cpp copasi/timesens/CTimeSensProblem.cpp.new + mv copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + touch -r copasi/timesens/CTimeSensMethod.cpp copasi/timesens/CTimeSensMethod.cpp.new + mv copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + touch -r copasi/timesens/CTimeSensLsodaMethod.cpp copasi/timesens/CTimeSensLsodaMethod.cpp.new + mv copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + touch -r copasi/tex/CStructureParser.cpp copasi/tex/CStructureParser.cpp.new + mv copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + touch -r copasi/tex/CMathMLToTeX.cpp copasi/tex/CMathMLToTeX.cpp.new + mv copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/test.cpp.new copasi/test2/test.cpp + touch -r copasi/test2/test.cpp copasi/test2/test.cpp.new + mv copasi/test2/test.cpp.new copasi/test2/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + touch -r copasi/test2/CNormalTranslation.cpp copasi/test2/CNormalTranslation.cpp.new + mv copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + touch -r copasi/test2/CNormalSum.cpp copasi/test2/CNormalSum.cpp.new + mv copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + touch -r copasi/test2/CNormalProduct.cpp copasi/test2/CNormalProduct.cpp.new + mv copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + touch -r copasi/test2/CNormalLcm.cpp copasi/test2/CNormalLcm.cpp.new + mv copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + touch -r copasi/test2/CNormalItemPower.cpp copasi/test2/CNormalItemPower.cpp.new + mv copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + touch -r copasi/test2/CNormalItem.cpp copasi/test2/CNormalItem.cpp.new + mv copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + touch -r copasi/test2/CNormalFraction.cpp copasi/test2/CNormalFraction.cpp.new + mv copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test/test.cpp.new copasi/test/test.cpp + touch -r copasi/test/test.cpp copasi/test/test.cpp.new + mv copasi/test/test.cpp.new copasi/test/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + touch -r copasi/steadystate/CSteadyStateTask.cpp copasi/steadystate/CSteadyStateTask.cpp.new + mv copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + touch -r copasi/steadystate/CSteadyStateProblem.cpp copasi/steadystate/CSteadyStateProblem.cpp.new + mv copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + touch -r copasi/steadystate/CSteadyStateMethod.cpp copasi/steadystate/CSteadyStateMethod.cpp.new + mv copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + touch -r copasi/steadystate/CNewtonMethod.cpp copasi/steadystate/CNewtonMethod.cpp.new + mv copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + touch -r copasi/steadystate/CMCATask.cpp copasi/steadystate/CMCATask.cpp.new + mv copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + touch -r copasi/steadystate/CMCAProblem.cpp copasi/steadystate/CMCAProblem.cpp.new + mv copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + touch -r copasi/steadystate/CMCAMethod.cpp copasi/steadystate/CMCAMethod.cpp.new + mv copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + touch -r copasi/steadystate/CEigen.cpp copasi/steadystate/CEigen.cpp.new + mv copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + touch -r copasi/sensitivities/CSensTask.cpp copasi/sensitivities/CSensTask.cpp.new + mv copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + touch -r copasi/sensitivities/CSensProblem.cpp copasi/sensitivities/CSensProblem.cpp.new + mv copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + touch -r copasi/sensitivities/CSensMethod.cpp copasi/sensitivities/CSensMethod.cpp.new + mv copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + touch -r copasi/sedml/SEDMLUtils.cpp copasi/sedml/SEDMLUtils.cpp.new + mv copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + touch -r copasi/sedml/SEDMLImporter.cpp copasi/sedml/SEDMLImporter.cpp.new + mv copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + touch -r copasi/sedml/CSEDMLExporter.cpp copasi/sedml/CSEDMLExporter.cpp.new + mv copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + touch -r copasi/scan/CScanTask.cpp copasi/scan/CScanTask.cpp.new + mv copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + touch -r copasi/scan/CScanProblem.cpp copasi/scan/CScanProblem.cpp.new + mv copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + touch -r copasi/scan/CScanMethod.cpp copasi/scan/CScanMethod.cpp.new + mv copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + touch -r copasi/sbmlunit/Expression2PresentationMMLUnits.cpp copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new + mv copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + touch -r copasi/sbmlunit/Expression2PresentationMML.cpp copasi/sbmlunit/Expression2PresentationMML.cpp.new + mv copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + touch -r copasi/sbmlunit/CSBMLunitInterface.cpp copasi/sbmlunit/CSBMLunitInterface.cpp.new + mv copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + touch -r copasi/sbmlunit/CSBMLunit.cpp copasi/sbmlunit/CSBMLunit.cpp.new + mv copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + touch -r copasi/sbml/unittests/utilities.cpp copasi/sbml/unittests/utilities.cpp.new + mv copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + touch -r copasi/sbml/unittests/test000104.cpp copasi/sbml/unittests/test000104.cpp.new + mv copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + touch -r copasi/sbml/unittests/test000103.cpp copasi/sbml/unittests/test000103.cpp.new + mv copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + touch -r copasi/sbml/unittests/test000102.cpp copasi/sbml/unittests/test000102.cpp.new + mv copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + touch -r copasi/sbml/unittests/test000101.cpp copasi/sbml/unittests/test000101.cpp.new + mv copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + touch -r copasi/sbml/unittests/test000100.cpp copasi/sbml/unittests/test000100.cpp.new + mv copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + touch -r copasi/sbml/unittests/test000099.cpp copasi/sbml/unittests/test000099.cpp.new + mv copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + touch -r copasi/sbml/unittests/test000098.cpp copasi/sbml/unittests/test000098.cpp.new + mv copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + touch -r copasi/sbml/unittests/test000097.cpp copasi/sbml/unittests/test000097.cpp.new + mv copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + touch -r copasi/sbml/unittests/test000096.cpp copasi/sbml/unittests/test000096.cpp.new + mv copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + touch -r copasi/sbml/unittests/test000095.cpp copasi/sbml/unittests/test000095.cpp.new + mv copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + touch -r copasi/sbml/unittests/test000094.cpp copasi/sbml/unittests/test000094.cpp.new + mv copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + touch -r copasi/sbml/unittests/test000093.cpp copasi/sbml/unittests/test000093.cpp.new + mv copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + touch -r copasi/sbml/unittests/test000092.cpp copasi/sbml/unittests/test000092.cpp.new + mv copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + touch -r copasi/sbml/unittests/test000091.cpp copasi/sbml/unittests/test000091.cpp.new + mv copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + touch -r copasi/sbml/unittests/test000090.cpp copasi/sbml/unittests/test000090.cpp.new + mv copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + touch -r copasi/sbml/unittests/test000089.cpp copasi/sbml/unittests/test000089.cpp.new + mv copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + touch -r copasi/sbml/unittests/test000088.cpp copasi/sbml/unittests/test000088.cpp.new + mv copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + touch -r copasi/sbml/unittests/test000087.cpp copasi/sbml/unittests/test000087.cpp.new + mv copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + touch -r copasi/sbml/unittests/test000086.cpp copasi/sbml/unittests/test000086.cpp.new + mv copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + touch -r copasi/sbml/unittests/test000085.cpp copasi/sbml/unittests/test000085.cpp.new + mv copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + touch -r copasi/sbml/unittests/test000084.cpp copasi/sbml/unittests/test000084.cpp.new + mv copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + touch -r copasi/sbml/unittests/test000083.cpp copasi/sbml/unittests/test000083.cpp.new + mv copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + touch -r copasi/sbml/unittests/test000082.cpp copasi/sbml/unittests/test000082.cpp.new + mv copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + touch -r copasi/sbml/unittests/test000081.cpp copasi/sbml/unittests/test000081.cpp.new + mv copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + touch -r copasi/sbml/unittests/test000080.cpp copasi/sbml/unittests/test000080.cpp.new + mv copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + touch -r copasi/sbml/unittests/test000079.cpp copasi/sbml/unittests/test000079.cpp.new + mv copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + touch -r copasi/sbml/unittests/test000078.cpp copasi/sbml/unittests/test000078.cpp.new + mv copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + touch -r copasi/sbml/unittests/test000077.cpp copasi/sbml/unittests/test000077.cpp.new + mv copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + touch -r copasi/sbml/unittests/test000076.cpp copasi/sbml/unittests/test000076.cpp.new + mv copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + touch -r copasi/sbml/unittests/test000075.cpp copasi/sbml/unittests/test000075.cpp.new + mv copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + touch -r copasi/sbml/unittests/test000074.cpp copasi/sbml/unittests/test000074.cpp.new + mv copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + touch -r copasi/sbml/unittests/test000073.cpp copasi/sbml/unittests/test000073.cpp.new + mv copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + touch -r copasi/sbml/unittests/test000072.cpp copasi/sbml/unittests/test000072.cpp.new + mv copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + touch -r copasi/sbml/unittests/test000071.cpp copasi/sbml/unittests/test000071.cpp.new + mv copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + touch -r copasi/sbml/unittests/test000070.cpp copasi/sbml/unittests/test000070.cpp.new + mv copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + touch -r copasi/sbml/unittests/test000069.cpp copasi/sbml/unittests/test000069.cpp.new + mv copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + touch -r copasi/sbml/unittests/test000068.cpp copasi/sbml/unittests/test000068.cpp.new + mv copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + touch -r copasi/sbml/unittests/test000067.cpp copasi/sbml/unittests/test000067.cpp.new + mv copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + touch -r copasi/sbml/unittests/test000066.cpp copasi/sbml/unittests/test000066.cpp.new + mv copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + touch -r copasi/sbml/unittests/test000065.cpp copasi/sbml/unittests/test000065.cpp.new + mv copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + touch -r copasi/sbml/unittests/test000064.cpp copasi/sbml/unittests/test000064.cpp.new + mv copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + touch -r copasi/sbml/unittests/test000063.cpp copasi/sbml/unittests/test000063.cpp.new + mv copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + touch -r copasi/sbml/unittests/test000062.cpp copasi/sbml/unittests/test000062.cpp.new + mv copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + touch -r copasi/sbml/unittests/test000061.cpp copasi/sbml/unittests/test000061.cpp.new + mv copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + touch -r copasi/sbml/unittests/test000060.cpp copasi/sbml/unittests/test000060.cpp.new + mv copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + touch -r copasi/sbml/unittests/test000059.cpp copasi/sbml/unittests/test000059.cpp.new + mv copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + touch -r copasi/sbml/unittests/test000058.cpp copasi/sbml/unittests/test000058.cpp.new + mv copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + touch -r copasi/sbml/unittests/test000057.cpp copasi/sbml/unittests/test000057.cpp.new + mv copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + touch -r copasi/sbml/unittests/test000056.cpp copasi/sbml/unittests/test000056.cpp.new + mv copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + touch -r copasi/sbml/unittests/test000055.cpp copasi/sbml/unittests/test000055.cpp.new + mv copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + touch -r copasi/sbml/unittests/test000054.cpp copasi/sbml/unittests/test000054.cpp.new + mv copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + touch -r copasi/sbml/unittests/test000053.cpp copasi/sbml/unittests/test000053.cpp.new + mv copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + touch -r copasi/sbml/unittests/test000052.cpp copasi/sbml/unittests/test000052.cpp.new + mv copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + touch -r copasi/sbml/unittests/test000051.cpp copasi/sbml/unittests/test000051.cpp.new + mv copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + touch -r copasi/sbml/unittests/test000050.cpp copasi/sbml/unittests/test000050.cpp.new + mv copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + touch -r copasi/sbml/unittests/test000049.cpp copasi/sbml/unittests/test000049.cpp.new + mv copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + touch -r copasi/sbml/unittests/test000048.cpp copasi/sbml/unittests/test000048.cpp.new + mv copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + touch -r copasi/sbml/unittests/test000047.cpp copasi/sbml/unittests/test000047.cpp.new + mv copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + touch -r copasi/sbml/unittests/test000046.cpp copasi/sbml/unittests/test000046.cpp.new + mv copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + touch -r copasi/sbml/unittests/test000045.cpp copasi/sbml/unittests/test000045.cpp.new + mv copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + touch -r copasi/sbml/unittests/test000044.cpp copasi/sbml/unittests/test000044.cpp.new + mv copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + touch -r copasi/sbml/unittests/test000043.cpp copasi/sbml/unittests/test000043.cpp.new + mv copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + touch -r copasi/sbml/unittests/test000042.cpp copasi/sbml/unittests/test000042.cpp.new + mv copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + touch -r copasi/sbml/unittests/test000041.cpp copasi/sbml/unittests/test000041.cpp.new + mv copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + touch -r copasi/sbml/unittests/test000040.cpp copasi/sbml/unittests/test000040.cpp.new + mv copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + touch -r copasi/sbml/unittests/test000039.cpp copasi/sbml/unittests/test000039.cpp.new + mv copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + touch -r copasi/sbml/unittests/test000038.cpp copasi/sbml/unittests/test000038.cpp.new + mv copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + touch -r copasi/sbml/unittests/test000037.cpp copasi/sbml/unittests/test000037.cpp.new + mv copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + touch -r copasi/sbml/unittests/test000036.cpp copasi/sbml/unittests/test000036.cpp.new + mv copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + touch -r copasi/sbml/unittests/test000035.cpp copasi/sbml/unittests/test000035.cpp.new + mv copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + touch -r copasi/sbml/unittests/test000034.cpp copasi/sbml/unittests/test000034.cpp.new + mv copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + touch -r copasi/sbml/unittests/test000033.cpp copasi/sbml/unittests/test000033.cpp.new + mv copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + touch -r copasi/sbml/unittests/test000032.cpp copasi/sbml/unittests/test000032.cpp.new + mv copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + touch -r copasi/sbml/unittests/test000031.cpp copasi/sbml/unittests/test000031.cpp.new + mv copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + touch -r copasi/sbml/unittests/test000030.cpp copasi/sbml/unittests/test000030.cpp.new + mv copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + touch -r copasi/sbml/unittests/test000029.cpp copasi/sbml/unittests/test000029.cpp.new + mv copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + touch -r copasi/sbml/unittests/test000028.cpp copasi/sbml/unittests/test000028.cpp.new + mv copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + touch -r copasi/sbml/unittests/test000027.cpp copasi/sbml/unittests/test000027.cpp.new + mv copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + touch -r copasi/sbml/unittests/test000026.cpp copasi/sbml/unittests/test000026.cpp.new + mv copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + touch -r copasi/sbml/unittests/test000025.cpp copasi/sbml/unittests/test000025.cpp.new + mv copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + touch -r copasi/sbml/unittests/test000024.cpp copasi/sbml/unittests/test000024.cpp.new + mv copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + touch -r copasi/sbml/unittests/test000023.cpp copasi/sbml/unittests/test000023.cpp.new + mv copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + touch -r copasi/sbml/unittests/test000022.cpp copasi/sbml/unittests/test000022.cpp.new + mv copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + touch -r copasi/sbml/unittests/test000021.cpp copasi/sbml/unittests/test000021.cpp.new + mv copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + touch -r copasi/sbml/unittests/test000020.cpp copasi/sbml/unittests/test000020.cpp.new + mv copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + touch -r copasi/sbml/unittests/test000019.cpp copasi/sbml/unittests/test000019.cpp.new + mv copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + touch -r copasi/sbml/unittests/test000018.cpp copasi/sbml/unittests/test000018.cpp.new + mv copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + touch -r copasi/sbml/unittests/test000017.cpp copasi/sbml/unittests/test000017.cpp.new + mv copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + touch -r copasi/sbml/unittests/test000016.cpp copasi/sbml/unittests/test000016.cpp.new + mv copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + touch -r copasi/sbml/unittests/test000015.cpp copasi/sbml/unittests/test000015.cpp.new + mv copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + touch -r copasi/sbml/unittests/test000014.cpp copasi/sbml/unittests/test000014.cpp.new + mv copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + touch -r copasi/sbml/unittests/test000013.cpp copasi/sbml/unittests/test000013.cpp.new + mv copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + touch -r copasi/sbml/unittests/test000012.cpp copasi/sbml/unittests/test000012.cpp.new + mv copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + touch -r copasi/sbml/unittests/test000011.cpp copasi/sbml/unittests/test000011.cpp.new + mv copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + touch -r copasi/sbml/unittests/test000010.cpp copasi/sbml/unittests/test000010.cpp.new + mv copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + touch -r copasi/sbml/unittests/test000009.cpp copasi/sbml/unittests/test000009.cpp.new + mv copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + touch -r copasi/sbml/unittests/test000008.cpp copasi/sbml/unittests/test000008.cpp.new + mv copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + touch -r copasi/sbml/unittests/test000007.cpp copasi/sbml/unittests/test000007.cpp.new + mv copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + touch -r copasi/sbml/unittests/test000006.cpp copasi/sbml/unittests/test000006.cpp.new + mv copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + touch -r copasi/sbml/unittests/test000005.cpp copasi/sbml/unittests/test000005.cpp.new + mv copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + touch -r copasi/sbml/unittests/test000004.cpp copasi/sbml/unittests/test000004.cpp.new + mv copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + touch -r copasi/sbml/unittests/test000003.cpp copasi/sbml/unittests/test000003.cpp.new + mv copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + touch -r copasi/sbml/unittests/test000002.cpp copasi/sbml/unittests/test000002.cpp.new + mv copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + touch -r copasi/sbml/unittests/test000001.cpp copasi/sbml/unittests/test000001.cpp.new + mv copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + touch -r copasi/sbml/unittests/test.cpp copasi/sbml/unittests/test.cpp.new + mv copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + touch -r copasi/sbml/StdException.cpp copasi/sbml/StdException.cpp.new + mv copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + touch -r copasi/sbml/SBMLUtils.cpp copasi/sbml/SBMLUtils.cpp.new + mv copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + touch -r copasi/sbml/SBMLUnitSupport.cpp copasi/sbml/SBMLUnitSupport.cpp.new + mv copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + touch -r copasi/sbml/SBMLReference.cpp copasi/sbml/SBMLReference.cpp.new + mv copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + touch -r copasi/sbml/SBMLIncompatibility.cpp copasi/sbml/SBMLIncompatibility.cpp.new + mv copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + touch -r copasi/sbml/SBMLImporter.cpp copasi/sbml/SBMLImporter.cpp.new + mv copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + touch -r copasi/sbml/ConverterASTNode.cpp copasi/sbml/ConverterASTNode.cpp.new + mv copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + touch -r copasi/sbml/CSBMLExporter.cpp copasi/sbml/CSBMLExporter.cpp.new + mv copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + touch -r copasi/sbml/CCellDesignerImporter.cpp copasi/sbml/CCellDesignerImporter.cpp.new + mv copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + touch -r copasi/resourcesUI/CQIconResource.cpp copasi/resourcesUI/CQIconResource.cpp.new + mv copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + touch -r copasi/report/CReportDefinitionVector.cpp copasi/report/CReportDefinitionVector.cpp.new + mv copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + touch -r copasi/report/CReportDefinition.cpp copasi/report/CReportDefinition.cpp.new + mv copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + touch -r copasi/report/CReportBody.cpp copasi/report/CReportBody.cpp.new + mv copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReport.cpp.new copasi/report/CReport.cpp + touch -r copasi/report/CReport.cpp copasi/report/CReport.cpp.new + mv copasi/report/CReport.cpp.new copasi/report/CReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + touch -r copasi/report/COutputAssistant.cpp copasi/report/COutputAssistant.cpp.new + mv copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + touch -r copasi/report/CKeyFactory.cpp copasi/report/CKeyFactory.cpp.new + mv copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + touch -r copasi/report/CDataHandler.cpp copasi/report/CDataHandler.cpp.new + mv copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + touch -r copasi/randomGenerator/Cr250.cpp copasi/randomGenerator/Cr250.cpp.new + mv copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + touch -r copasi/randomGenerator/Cmt19937.cpp copasi/randomGenerator/Cmt19937.cpp.new + mv copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + touch -r copasi/randomGenerator/CRandom.cpp copasi/randomGenerator/CRandom.cpp.new + mv copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + touch -r copasi/randomGenerator/CPermutation.cpp copasi/randomGenerator/CPermutation.cpp.new + mv copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + touch -r copasi/qlayout/CQZoomableView.cpp copasi/qlayout/CQZoomableView.cpp.new + mv copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + touch -r copasi/qlayout/CQStyledGraphicsItem.cpp copasi/qlayout/CQStyledGraphicsItem.cpp.new + mv copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + touch -r copasi/qlayout/CQRoundedRect.cpp copasi/qlayout/CQRoundedRect.cpp.new + mv copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + touch -r copasi/qlayout/CQRenderConverter.cpp copasi/qlayout/CQRenderConverter.cpp.new + mv copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + touch -r copasi/qlayout/CQLayoutView.cpp copasi/qlayout/CQLayoutView.cpp.new + mv copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + touch -r copasi/qlayout/CQLayoutScene.cpp copasi/qlayout/CQLayoutScene.cpp.new + mv copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + touch -r copasi/qlayout/CQLabelGraphicsItem.cpp copasi/qlayout/CQLabelGraphicsItem.cpp.new + mv copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + touch -r copasi/qlayout/CQElementProperties.cpp copasi/qlayout/CQElementProperties.cpp.new + mv copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + touch -r copasi/qlayout/CQEffectDescriptionEdit.cpp copasi/qlayout/CQEffectDescriptionEdit.cpp.new + mv copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + touch -r copasi/qlayout/CQEffectDescription.cpp copasi/qlayout/CQEffectDescription.cpp.new + mv copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + touch -r copasi/qlayout/CQCopasiGraphicsItem.cpp copasi/qlayout/CQCopasiGraphicsItem.cpp.new + mv copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + touch -r copasi/qlayout/CQCopasiEffect.cpp copasi/qlayout/CQCopasiEffect.cpp.new + mv copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + touch -r copasi/qlayout/CQCopasiAnimation.cpp copasi/qlayout/CQCopasiAnimation.cpp.new + mv copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + touch -r copasi/qlayout/CQConnectionGraphicsItem.cpp copasi/qlayout/CQConnectionGraphicsItem.cpp.new + mv copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + touch -r copasi/qlayout/CQAnimationWindow.cpp copasi/qlayout/CQAnimationWindow.cpp.new + mv copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + touch -r copasi/qlayout/CQAnimationSettingsEditor.cpp copasi/qlayout/CQAnimationSettingsEditor.cpp.new + mv copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + touch -r copasi/qlayout/CQAnimationControls.cpp copasi/qlayout/CQAnimationControls.cpp.new + mv copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + touch -r copasi/pvmtest/pvmtest.cpp copasi/pvmtest/pvmtest.cpp.new + mv copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + touch -r copasi/plotUI/scrollzoomer.cpp copasi/plotUI/scrollzoomer.cpp.new + mv copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + touch -r copasi/plotUI/scrollbar.cpp copasi/plotUI/scrollbar.cpp.new + mv copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + touch -r copasi/plotUI/plotwindow.cpp copasi/plotUI/plotwindow.cpp.new + mv copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + touch -r copasi/plotUI/curve2dwidget.cpp copasi/plotUI/curve2dwidget.cpp.new + mv copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + touch -r copasi/plotUI/HistoWidget.cpp copasi/plotUI/HistoWidget.cpp.new + mv copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + touch -r copasi/plotUI/CSpectorgramData.cpp copasi/plotUI/CSpectorgramData.cpp.new + mv copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + touch -r copasi/plotUI/CQwtPlot.cpp copasi/plotUI/CQwtPlot.cpp.new + mv copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + touch -r copasi/plotUI/CQtChartsPlot.cpp copasi/plotUI/CQtChartsPlot.cpp.new + mv copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + touch -r copasi/plotUI/CQSpectogramWidget.cpp copasi/plotUI/CQSpectogramWidget.cpp.new + mv copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + touch -r copasi/plotUI/CQPlotSubwidget.cpp copasi/plotUI/CQPlotSubwidget.cpp.new + mv copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + touch -r copasi/plotUI/CQPlotEditWidget.cpp copasi/plotUI/CQPlotEditWidget.cpp.new + mv copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + touch -r copasi/plotUI/CQPlotColors.cpp copasi/plotUI/CQPlotColors.cpp.new + mv copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + touch -r copasi/plotUI/CQMarchingSquares.cpp copasi/plotUI/CQMarchingSquares.cpp.new + mv copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + touch -r copasi/plotUI/CQExtender.cpp copasi/plotUI/CQExtender.cpp.new + mv copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + touch -r copasi/plotUI/CQDataVizPlot.cpp copasi/plotUI/CQDataVizPlot.cpp.new + mv copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + touch -r copasi/plotUI/CQCustomPlot.cpp copasi/plotUI/CQCustomPlot.cpp.new + mv copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + touch -r copasi/plotUI/CQAdvancedPlotSettings.cpp copasi/plotUI/CQAdvancedPlotSettings.cpp.new + mv copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + touch -r copasi/plotUI/CPlotSpectogram.cpp copasi/plotUI/CPlotSpectogram.cpp.new + mv copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + touch -r copasi/plotUI/CPlotInterface.cpp copasi/plotUI/CPlotInterface.cpp.new + mv copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + touch -r copasi/plotUI/COutputHandlerPlot.cpp copasi/plotUI/COutputHandlerPlot.cpp.new + mv copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + touch -r copasi/plotUI/CLinearColorMap.cpp copasi/plotUI/CLinearColorMap.cpp.new + mv copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + touch -r copasi/plotUI/CHistoCurveData.cpp copasi/plotUI/CHistoCurveData.cpp.new + mv copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + touch -r copasi/plotUI/CBandedGraphData.cpp copasi/plotUI/CBandedGraphData.cpp.new + mv copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + touch -r copasi/plotUI/C2DPlotCurve.cpp copasi/plotUI/C2DPlotCurve.cpp.new + mv copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + touch -r copasi/plotUI/C2DCurveData.cpp copasi/plotUI/C2DCurveData.cpp.new + mv copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + touch -r copasi/plotUI/BandedGraphWidget.cpp copasi/plotUI/BandedGraphWidget.cpp.new + mv copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + touch -r copasi/plot/CPlotSpecification.cpp copasi/plot/CPlotSpecification.cpp.new + mv copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + touch -r copasi/plot/CPlotItem.cpp copasi/plot/CPlotItem.cpp.new + mv copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + touch -r copasi/plot/CPlotColors.cpp copasi/plot/CPlotColors.cpp.new + mv copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + touch -r copasi/plot/COutputDefinitionVector.cpp copasi/plot/COutputDefinitionVector.cpp.new + mv copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + touch -r copasi/parameterFitting/CFitTask.cpp copasi/parameterFitting/CFitTask.cpp.new + mv copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + touch -r copasi/parameterFitting/CFitProblem.cpp copasi/parameterFitting/CFitProblem.cpp.new + mv copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + touch -r copasi/parameterFitting/CFitItem.cpp copasi/parameterFitting/CFitItem.cpp.new + mv copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + touch -r copasi/parameterFitting/CExperimentSet.cpp copasi/parameterFitting/CExperimentSet.cpp.new + mv copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + touch -r copasi/parameterFitting/CExperimentObjectMap.cpp copasi/parameterFitting/CExperimentObjectMap.cpp.new + mv copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + touch -r copasi/parameterFitting/CExperimentFileInfo.cpp copasi/parameterFitting/CExperimentFileInfo.cpp.new + mv copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + touch -r copasi/parameterFitting/CExperiment.cpp copasi/parameterFitting/CExperiment.cpp.new + mv copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + touch -r copasi/output/COutputHandler.cpp copasi/output/COutputHandler.cpp.new + mv copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + touch -r copasi/oscillation/COscillationTask.cpp copasi/oscillation/COscillationTask.cpp.new + mv copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + touch -r copasi/oscillation/COscillationProblem.cpp copasi/oscillation/COscillationProblem.cpp.new + mv copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + touch -r copasi/oscillation/COscillationMethodIntegrate.cpp copasi/oscillation/COscillationMethodIntegrate.cpp.new + mv copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + touch -r copasi/oscillation/COscillationMethod.cpp copasi/oscillation/COscillationMethod.cpp.new + mv copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + touch -r copasi/optimization/FminBrent.cpp copasi/optimization/FminBrent.cpp.new + mv copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + touch -r copasi/optimization/CTruncatedNewton.cpp copasi/optimization/CTruncatedNewton.cpp.new + mv copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + touch -r copasi/optimization/CRealProblem.cpp copasi/optimization/CRealProblem.cpp.new + mv copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + touch -r copasi/optimization/CRandomSearch.cpp copasi/optimization/CRandomSearch.cpp.new + mv copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + touch -r copasi/optimization/CPraxis.cpp copasi/optimization/CPraxis.cpp.new + mv copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + touch -r copasi/optimization/COptTask.cpp copasi/optimization/COptTask.cpp.new + mv copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + touch -r copasi/optimization/COptProblem.cpp copasi/optimization/COptProblem.cpp.new + mv copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + touch -r copasi/optimization/COptPopulationMethod.cpp copasi/optimization/COptPopulationMethod.cpp.new + mv copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + touch -r copasi/optimization/COptMethodTruncatedNewton.cpp copasi/optimization/COptMethodTruncatedNewton.cpp.new + mv copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + touch -r copasi/optimization/COptMethodSteepestDescent.cpp copasi/optimization/COptMethodSteepestDescent.cpp.new + mv copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + touch -r copasi/optimization/COptMethodStatistics.cpp copasi/optimization/COptMethodStatistics.cpp.new + mv copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + touch -r copasi/optimization/COptMethodSS.cpp copasi/optimization/COptMethodSS.cpp.new + mv copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + touch -r copasi/optimization/COptMethodSRES.cpp copasi/optimization/COptMethodSRES.cpp.new + mv copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + touch -r copasi/optimization/COptMethodSA.cpp copasi/optimization/COptMethodSA.cpp.new + mv copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + touch -r copasi/optimization/COptMethodPraxis.cpp copasi/optimization/COptMethodPraxis.cpp.new + mv copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + touch -r copasi/optimization/COptMethodPS.cpp copasi/optimization/COptMethodPS.cpp.new + mv copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + touch -r copasi/optimization/COptMethodNelderMead.cpp copasi/optimization/COptMethodNelderMead.cpp.new + mv copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + touch -r copasi/optimization/COptMethodNL2SOL.cpp copasi/optimization/COptMethodNL2SOL.cpp.new + mv copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + touch -r copasi/optimization/COptMethodLevenbergMarquardt.cpp copasi/optimization/COptMethodLevenbergMarquardt.cpp.new + mv copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + touch -r copasi/optimization/COptMethodHookeJeeves.cpp copasi/optimization/COptMethodHookeJeeves.cpp.new + mv copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + touch -r copasi/optimization/COptMethodGASR.cpp copasi/optimization/COptMethodGASR.cpp.new + mv copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + touch -r copasi/optimization/COptMethodGA.cpp copasi/optimization/COptMethodGA.cpp.new + mv copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + touch -r copasi/optimization/COptMethodEP.cpp copasi/optimization/COptMethodEP.cpp.new + mv copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + touch -r copasi/optimization/COptMethodDE.cpp copasi/optimization/COptMethodDE.cpp.new + mv copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + touch -r copasi/optimization/COptMethodCoranaWalk.cpp copasi/optimization/COptMethodCoranaWalk.cpp.new + mv copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + touch -r copasi/optimization/COptMethod.cpp copasi/optimization/COptMethod.cpp.new + mv copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + touch -r copasi/optimization/COptLogItem.cpp copasi/optimization/COptLogItem.cpp.new + mv copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + touch -r copasi/optimization/COptLogEntry.cpp copasi/optimization/COptLogEntry.cpp.new + mv copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + touch -r copasi/optimization/COptLog.cpp copasi/optimization/COptLog.cpp.new + mv copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + touch -r copasi/optimization/COptItem.cpp copasi/optimization/COptItem.cpp.new + mv copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + touch -r copasi/optimization/CNL2SOL.cpp copasi/optimization/CNL2SOL.cpp.new + mv copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + touch -r copasi/odepack++/dstoda.cpp copasi/odepack++/dstoda.cpp.new + mv copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + touch -r copasi/odepack++/dsolsy.cpp copasi/odepack++/dsolsy.cpp.new + mv copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + touch -r copasi/odepack++/drcheck.cpp copasi/odepack++/drcheck.cpp.new + mv copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + touch -r copasi/odepack++/dprja.cpp copasi/odepack++/dprja.cpp.new + mv copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + touch -r copasi/odepack++/dmnorm.cpp copasi/odepack++/dmnorm.cpp.new + mv copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + touch -r copasi/odepack++/dintdy.cpp copasi/odepack++/dintdy.cpp.new + mv copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + touch -r copasi/odepack++/dfnorm.cpp copasi/odepack++/dfnorm.cpp.new + mv copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + touch -r copasi/odepack++/dewset.cpp copasi/odepack++/dewset.cpp.new + mv copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + touch -r copasi/odepack++/decsol.cpp copasi/odepack++/decsol.cpp.new + mv copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + touch -r copasi/odepack++/dcfode.cpp copasi/odepack++/dcfode.cpp.new + mv copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + touch -r copasi/odepack++/dc_decsol.cpp copasi/odepack++/dc_decsol.cpp.new + mv copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + touch -r copasi/odepack++/dbnorm.cpp copasi/odepack++/dbnorm.cpp.new + mv copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + touch -r copasi/odepack++/common.cpp copasi/odepack++/common.cpp.new + mv copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + touch -r copasi/odepack++/Cxerrwd.cpp copasi/odepack++/Cxerrwd.cpp.new + mv copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + touch -r copasi/odepack++/CRadau5.cpp copasi/odepack++/CRadau5.cpp.new + mv copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + touch -r copasi/odepack++/CLSODAR.cpp copasi/odepack++/CLSODAR.cpp.new + mv copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + touch -r copasi/odepack++/CLSODA.cpp copasi/odepack++/CLSODA.cpp.new + mv copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + touch -r copasi/odepack++/CInternalSolver.cpp copasi/odepack++/CInternalSolver.cpp.new + mv copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + touch -r copasi/moieties/CMoietiesTask.cpp copasi/moieties/CMoietiesTask.cpp.new + mv copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + touch -r copasi/moieties/CMoietiesProblem.cpp copasi/moieties/CMoietiesProblem.cpp.new + mv copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + touch -r copasi/moieties/CMoietiesMethod.cpp copasi/moieties/CMoietiesMethod.cpp.new + mv copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CState.cpp.new copasi/model/CState.cpp + touch -r copasi/model/CState.cpp copasi/model/CState.cpp.new + mv copasi/model/CState.cpp.new copasi/model/CState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + touch -r copasi/model/CReactionInterface.cpp copasi/model/CReactionInterface.cpp.new + mv copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + touch -r copasi/model/CReaction.cpp copasi/model/CReaction.cpp.new + mv copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + touch -r copasi/model/CObjectLists.cpp copasi/model/CObjectLists.cpp.new + mv copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + touch -r copasi/model/CMoiety.cpp copasi/model/CMoiety.cpp.new + mv copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + touch -r copasi/model/CModelValue.cpp copasi/model/CModelValue.cpp.new + mv copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + touch -r copasi/model/CModelParameterSet.cpp copasi/model/CModelParameterSet.cpp.new + mv copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + touch -r copasi/model/CModelParameterGroup.cpp copasi/model/CModelParameterGroup.cpp.new + mv copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + touch -r copasi/model/CModelParameter.cpp copasi/model/CModelParameter.cpp.new + mv copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + touch -r copasi/model/CModelMerging.cpp copasi/model/CModelMerging.cpp.new + mv copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + touch -r copasi/model/CModelExpansion.cpp copasi/model/CModelExpansion.cpp.new + mv copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + touch -r copasi/model/CModelAnalyzer.cpp copasi/model/CModelAnalyzer.cpp.new + mv copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModel.cpp.new copasi/model/CModel.cpp + touch -r copasi/model/CModel.cpp copasi/model/CModel.cpp.new + mv copasi/model/CModel.cpp.new copasi/model/CModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + touch -r copasi/model/CMetabNameInterface.cpp copasi/model/CMetabNameInterface.cpp.new + mv copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + touch -r copasi/model/CMetab.cpp copasi/model/CMetab.cpp.new + mv copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + touch -r copasi/model/CMMLOutput.cpp copasi/model/CMMLOutput.cpp.new + mv copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + touch -r copasi/model/CEvent.cpp copasi/model/CEvent.cpp.new + mv copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + touch -r copasi/model/CCompartment.cpp copasi/model/CCompartment.cpp.new + mv copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + touch -r copasi/model/CChemEqParser_yacc.cpp copasi/model/CChemEqParser_yacc.cpp.new + mv copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + touch -r copasi/model/CChemEqParser_lex.cpp copasi/model/CChemEqParser_lex.cpp.new + mv copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + touch -r copasi/model/CChemEqParser.cpp copasi/model/CChemEqParser.cpp.new + mv copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + touch -r copasi/model/CChemEqInterface.cpp copasi/model/CChemEqInterface.cpp.new + mv copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + touch -r copasi/model/CChemEqElement.cpp copasi/model/CChemEqElement.cpp.new + mv copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + touch -r copasi/model/CChemEq.cpp copasi/model/CChemEq.cpp.new + mv copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + touch -r copasi/model/CAnnotation.cpp copasi/model/CAnnotation.cpp.new + mv copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + touch -r copasi/miase/CMiaseTask.cpp copasi/miase/CMiaseTask.cpp.new + mv copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + touch -r copasi/miase/CMiaseSimulation.cpp copasi/miase/CMiaseSimulation.cpp.new + mv copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + touch -r copasi/miase/CMiaseParser.cpp copasi/miase/CMiaseParser.cpp.new + mv copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + touch -r copasi/miase/CMiaseOutput.cpp copasi/miase/CMiaseOutput.cpp.new + mv copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + touch -r copasi/miase/CMiaseModel.cpp copasi/miase/CMiaseModel.cpp.new + mv copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + touch -r copasi/miase/CMiaseML.cpp copasi/miase/CMiaseML.cpp.new + mv copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + touch -r copasi/miase/CMiaseBase.cpp copasi/miase/CMiaseBase.cpp.new + mv copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + touch -r copasi/math/CMathUpdateSequence.cpp copasi/math/CMathUpdateSequence.cpp.new + mv copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + touch -r copasi/math/CMathReaction.cpp copasi/math/CMathReaction.cpp.new + mv copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + touch -r copasi/math/CMathObject.cpp copasi/math/CMathObject.cpp.new + mv copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + touch -r copasi/math/CMathHistory.cpp copasi/math/CMathHistory.cpp.new + mv copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + touch -r copasi/math/CMathExpression.cpp copasi/math/CMathExpression.cpp.new + mv copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + touch -r copasi/math/CMathEventQueue.cpp copasi/math/CMathEventQueue.cpp.new + mv copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + touch -r copasi/math/CMathEvent.cpp copasi/math/CMathEvent.cpp.new + mv copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + touch -r copasi/math/CMathEnum.cpp copasi/math/CMathEnum.cpp.new + mv copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + touch -r copasi/math/CMathDerive.cpp copasi/math/CMathDerive.cpp.new + mv copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + touch -r copasi/math/CMathDependencyNodeIterator.cpp copasi/math/CMathDependencyNodeIterator.cpp.new + mv copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + touch -r copasi/math/CMathDependencyNode.cpp copasi/math/CMathDependencyNode.cpp.new + mv copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + touch -r copasi/math/CMathDependencyGraph.cpp copasi/math/CMathDependencyGraph.cpp.new + mv copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + touch -r copasi/math/CMathDelay.cpp copasi/math/CMathDelay.cpp.new + mv copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + touch -r copasi/math/CMathContainer.cpp copasi/math/CMathContainer.cpp.new + mv copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + touch -r copasi/math/CJitExpression.cpp copasi/math/CJitExpression.cpp.new + mv copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + touch -r copasi/math/CJitCompilerImplementation.cpp copasi/math/CJitCompilerImplementation.cpp.new + mv copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + touch -r copasi/math/CJitCompiler.cpp copasi/math/CJitCompiler.cpp.new + mv copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + touch -r copasi/lyap/CLyapWolfMethod.cpp copasi/lyap/CLyapWolfMethod.cpp.new + mv copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + touch -r copasi/lyap/CLyapTask.cpp copasi/lyap/CLyapTask.cpp.new + mv copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + touch -r copasi/lyap/CLyapProblem.cpp copasi/lyap/CLyapProblem.cpp.new + mv copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + touch -r copasi/lyap/CLyapMethod.cpp copasi/lyap/CLyapMethod.cpp.new + mv copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + touch -r copasi/lna/CLNATask.cpp copasi/lna/CLNATask.cpp.new + mv copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + touch -r copasi/lna/CLNAProblem.cpp copasi/lna/CLNAProblem.cpp.new + mv copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + touch -r copasi/lna/CLNAMethod.cpp copasi/lna/CLNAMethod.cpp.new + mv copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + touch -r copasi/layoutUI/RGTextureSpec.cpp copasi/layoutUI/RGTextureSpec.cpp.new + mv copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + touch -r copasi/layoutUI/ParaPanel.cpp copasi/layoutUI/ParaPanel.cpp.new + mv copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + touch -r copasi/layoutUI/NodeSizePanel.cpp copasi/layoutUI/NodeSizePanel.cpp.new + mv copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + touch -r copasi/layoutUI/FontChooser.cpp copasi/layoutUI/FontChooser.cpp.new + mv copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + touch -r copasi/layoutUI/CVisParameters.cpp copasi/layoutUI/CVisParameters.cpp.new + mv copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + touch -r copasi/layoutUI/CSimSummaryInfo.cpp copasi/layoutUI/CSimSummaryInfo.cpp.new + mv copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + touch -r copasi/layoutUI/CQSpringLayoutParameterWindow.cpp copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new + mv copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + touch -r copasi/layoutUI/CQScreenshotOptionsDialog.cpp copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new + mv copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + touch -r copasi/layoutUI/CQQtImageTexturizer.cpp copasi/layoutUI/CQQtImageTexturizer.cpp.new + mv copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + touch -r copasi/layoutUI/CQPlayerControlWidget.cpp copasi/layoutUI/CQPlayerControlWidget.cpp.new + mv copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + touch -r copasi/layoutUI/CQNewMainWindow.cpp copasi/layoutUI/CQNewMainWindow.cpp.new + mv copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + touch -r copasi/layoutUI/CQLayoutThread.cpp copasi/layoutUI/CQLayoutThread.cpp.new + mv copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + touch -r copasi/layoutUI/CQLayoutMainWindow.cpp copasi/layoutUI/CQLayoutMainWindow.cpp.new + mv copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + touch -r copasi/layoutUI/CQGLViewport.cpp copasi/layoutUI/CQGLViewport.cpp.new + mv copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + touch -r copasi/layoutUI/CQGLNetworkPainter.cpp copasi/layoutUI/CQGLNetworkPainter.cpp.new + mv copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + touch -r copasi/layoutUI/CQGLLayoutViewer.cpp copasi/layoutUI/CQGLLayoutViewer.cpp.new + mv copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + touch -r copasi/layoutUI/CQGLLayoutPainter.cpp copasi/layoutUI/CQGLLayoutPainter.cpp.new + mv copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + touch -r copasi/layoutUI/CQFontRenderer.cpp copasi/layoutUI/CQFontRenderer.cpp.new + mv copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + touch -r copasi/layoutUI/CQCurrentValueTable.cpp copasi/layoutUI/CQCurrentValueTable.cpp.new + mv copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + touch -r copasi/layoutUI/CQAutolayoutWizard.cpp copasi/layoutUI/CQAutolayoutWizard.cpp.new + mv copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + touch -r copasi/layoutUI/CLabel.cpp copasi/layoutUI/CLabel.cpp.new + mv copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + touch -r copasi/layoutUI/CGraphNode.cpp copasi/layoutUI/CGraphNode.cpp.new + mv copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + touch -r copasi/layoutUI/CGraphCurve.cpp copasi/layoutUI/CGraphCurve.cpp.new + mv copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + touch -r copasi/layoutUI/CDataEntity.cpp copasi/layoutUI/CDataEntity.cpp.new + mv copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + touch -r copasi/layoutUI/CCompartmentGraphNode.cpp copasi/layoutUI/CCompartmentGraphNode.cpp.new + mv copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + touch -r copasi/layoutUI/CArrow.cpp copasi/layoutUI/CArrow.cpp.new + mv copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + touch -r copasi/layoutUI/BezierCurve.cpp copasi/layoutUI/BezierCurve.cpp.new + mv copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + touch -r copasi/layout/utility_classes.cpp copasi/layout/utility_classes.cpp.new + mv copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + touch -r copasi/layout/SBMLDocumentLoader.cpp copasi/layout/SBMLDocumentLoader.cpp.new + mv copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + touch -r copasi/layout/CListOfLayouts.cpp copasi/layout/CListOfLayouts.cpp.new + mv copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + touch -r copasi/layout/CLayoutState.cpp copasi/layout/CLayoutState.cpp.new + mv copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + touch -r copasi/layout/CLayoutInitializer.cpp copasi/layout/CLayoutInitializer.cpp.new + mv copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + touch -r copasi/layout/CLayoutEngine.cpp copasi/layout/CLayoutEngine.cpp.new + mv copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + touch -r copasi/layout/CLayout.cpp copasi/layout/CLayout.cpp.new + mv copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + touch -r copasi/layout/CLUnresolvedReferenceException.cpp copasi/layout/CLUnresolvedReferenceException.cpp.new + mv copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + touch -r copasi/layout/CLTransformation2D.cpp copasi/layout/CLTransformation2D.cpp.new + mv copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + touch -r copasi/layout/CLTransformation.cpp copasi/layout/CLTransformation.cpp.new + mv copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + touch -r copasi/layout/CLText.cpp copasi/layout/CLText.cpp.new + mv copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + touch -r copasi/layout/CLStyle.cpp copasi/layout/CLStyle.cpp.new + mv copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + touch -r copasi/layout/CLSimpleImageTexturizer.cpp copasi/layout/CLSimpleImageTexturizer.cpp.new + mv copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + touch -r copasi/layout/CLRenderResolver.cpp copasi/layout/CLRenderResolver.cpp.new + mv copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + touch -r copasi/layout/CLRenderPoint.cpp copasi/layout/CLRenderPoint.cpp.new + mv copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + touch -r copasi/layout/CLRenderInformationBase.cpp copasi/layout/CLRenderInformationBase.cpp.new + mv copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + touch -r copasi/layout/CLRenderFlattener.cpp copasi/layout/CLRenderFlattener.cpp.new + mv copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + touch -r copasi/layout/CLRenderCurve.cpp copasi/layout/CLRenderCurve.cpp.new + mv copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + touch -r copasi/layout/CLRenderCubicBezier.cpp copasi/layout/CLRenderCubicBezier.cpp.new + mv copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + touch -r copasi/layout/CLRelAbsVector.cpp copasi/layout/CLRelAbsVector.cpp.new + mv copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + touch -r copasi/layout/CLRectangle.cpp copasi/layout/CLRectangle.cpp.new + mv copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + touch -r copasi/layout/CLReactionGlyph.cpp copasi/layout/CLReactionGlyph.cpp.new + mv copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + touch -r copasi/layout/CLRadialGradient.cpp copasi/layout/CLRadialGradient.cpp.new + mv copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + touch -r copasi/layout/CLPolygon.cpp copasi/layout/CLPolygon.cpp.new + mv copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + touch -r copasi/layout/CLLocalStyle.cpp copasi/layout/CLLocalStyle.cpp.new + mv copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + touch -r copasi/layout/CLLocalRenderInformation.cpp copasi/layout/CLLocalRenderInformation.cpp.new + mv copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + touch -r copasi/layout/CLLinearGradient.cpp copasi/layout/CLLinearGradient.cpp.new + mv copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + touch -r copasi/layout/CLLineEnding.cpp copasi/layout/CLLineEnding.cpp.new + mv copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + touch -r copasi/layout/CLLayoutRenderer.cpp copasi/layout/CLLayoutRenderer.cpp.new + mv copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + touch -r copasi/layout/CLImageTexturizer.cpp copasi/layout/CLImageTexturizer.cpp.new + mv copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + touch -r copasi/layout/CLImage.cpp copasi/layout/CLImage.cpp.new + mv copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + touch -r copasi/layout/CLGroup.cpp copasi/layout/CLGroup.cpp.new + mv copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + touch -r copasi/layout/CLGraphicalPrimitive2D.cpp copasi/layout/CLGraphicalPrimitive2D.cpp.new + mv copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + touch -r copasi/layout/CLGraphicalPrimitive1D.cpp copasi/layout/CLGraphicalPrimitive1D.cpp.new + mv copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + touch -r copasi/layout/CLGraphicalObject.cpp copasi/layout/CLGraphicalObject.cpp.new + mv copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + touch -r copasi/layout/CLGradientStops.cpp copasi/layout/CLGradientStops.cpp.new + mv copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + touch -r copasi/layout/CLGradientStop.cpp copasi/layout/CLGradientStop.cpp.new + mv copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + touch -r copasi/layout/CLGradientBase.cpp copasi/layout/CLGradientBase.cpp.new + mv copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + touch -r copasi/layout/CLGlyphs.cpp copasi/layout/CLGlyphs.cpp.new + mv copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + touch -r copasi/layout/CLGlobalStyle.cpp copasi/layout/CLGlobalStyle.cpp.new + mv copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + touch -r copasi/layout/CLGlobalRenderInformation.cpp copasi/layout/CLGlobalRenderInformation.cpp.new + mv copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + touch -r copasi/layout/CLEllipse.cpp copasi/layout/CLEllipse.cpp.new + mv copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + touch -r copasi/layout/CLDefaultStyles.cpp copasi/layout/CLDefaultStyles.cpp.new + mv copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + touch -r copasi/layout/CLCurve.cpp copasi/layout/CLCurve.cpp.new + mv copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + touch -r copasi/layout/CLColorDefinition.cpp copasi/layout/CLColorDefinition.cpp.new + mv copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + touch -r copasi/layout/CLBase.cpp copasi/layout/CLBase.cpp.new + mv copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + touch -r copasi/layout/CCopasiSpringLayout.cpp copasi/layout/CCopasiSpringLayout.cpp.new + mv copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + touch -r copasi/layout/CAbstractLayoutInterface.cpp copasi/layout/CAbstractLayoutInterface.cpp.new + mv copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + touch -r copasi/function/CNodeK.cpp copasi/function/CNodeK.cpp.new + mv copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + touch -r copasi/function/CMassAction.cpp copasi/function/CMassAction.cpp.new + mv copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + touch -r copasi/function/CKinFunction.cpp copasi/function/CKinFunction.cpp.new + mv copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + touch -r copasi/function/CFunctionParameters.cpp copasi/function/CFunctionParameters.cpp.new + mv copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + touch -r copasi/function/CFunctionParameter.cpp copasi/function/CFunctionParameter.cpp.new + mv copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + touch -r copasi/function/CFunctionDB.cpp copasi/function/CFunctionDB.cpp.new + mv copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + touch -r copasi/function/CFunctionAnalyzer.cpp copasi/function/CFunctionAnalyzer.cpp.new + mv copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + touch -r copasi/function/CFunction.cpp copasi/function/CFunction.cpp.new + mv copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + touch -r copasi/function/CExpression.cpp copasi/function/CExpression.cpp.new + mv copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + touch -r copasi/function/CEvaluationTree.cpp copasi/function/CEvaluationTree.cpp.new + mv copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + touch -r copasi/function/CEvaluationParser_yacc.cpp copasi/function/CEvaluationParser_yacc.cpp.new + mv copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + touch -r copasi/function/CEvaluationNodeWhiteSpace.cpp copasi/function/CEvaluationNodeWhiteSpace.cpp.new + mv copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + touch -r copasi/function/CEvaluationNodeVector.cpp copasi/function/CEvaluationNodeVector.cpp.new + mv copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + touch -r copasi/function/CEvaluationNodeVariable.cpp copasi/function/CEvaluationNodeVariable.cpp.new + mv copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + touch -r copasi/function/CEvaluationNodeUnit.cpp copasi/function/CEvaluationNodeUnit.cpp.new + mv copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + touch -r copasi/function/CEvaluationNodeStructure.cpp copasi/function/CEvaluationNodeStructure.cpp.new + mv copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + touch -r copasi/function/CEvaluationNodeOperator.cpp copasi/function/CEvaluationNodeOperator.cpp.new + mv copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + touch -r copasi/function/CEvaluationNodeObject.cpp copasi/function/CEvaluationNodeObject.cpp.new + mv copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + touch -r copasi/function/CEvaluationNodeNumber.cpp copasi/function/CEvaluationNodeNumber.cpp.new + mv copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + touch -r copasi/function/CEvaluationNodeLogical.cpp copasi/function/CEvaluationNodeLogical.cpp.new + mv copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + touch -r copasi/function/CEvaluationNodeFunction.cpp copasi/function/CEvaluationNodeFunction.cpp.new + mv copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + touch -r copasi/function/CEvaluationNodeDelay.cpp copasi/function/CEvaluationNodeDelay.cpp.new + mv copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + touch -r copasi/function/CEvaluationNodeConstant.cpp copasi/function/CEvaluationNodeConstant.cpp.new + mv copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + touch -r copasi/function/CEvaluationNodeChoice.cpp copasi/function/CEvaluationNodeChoice.cpp.new + mv copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + touch -r copasi/function/CEvaluationNodeCall.cpp copasi/function/CEvaluationNodeCall.cpp.new + mv copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + touch -r copasi/function/CEvaluationNode.cpp copasi/function/CEvaluationNode.cpp.new + mv copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + touch -r copasi/function/CEvaluationLexer_lex.cpp copasi/function/CEvaluationLexer_lex.cpp.new + mv copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + touch -r copasi/function/CDerive.cpp copasi/function/CDerive.cpp.new + mv copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + touch -r copasi/function/CCallParameters.cpp copasi/function/CCallParameters.cpp.new + mv copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + touch -r copasi/elementaryFluxModes/CZeroSet.cpp copasi/elementaryFluxModes/CZeroSet.cpp.new + mv copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + touch -r copasi/elementaryFluxModes/CTableauMatrix.cpp copasi/elementaryFluxModes/CTableauMatrix.cpp.new + mv copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + touch -r copasi/elementaryFluxModes/CTableauLine.cpp copasi/elementaryFluxModes/CTableauLine.cpp.new + mv copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + touch -r copasi/elementaryFluxModes/CStepMatrixColumn.cpp copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new + mv copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + touch -r copasi/elementaryFluxModes/CStepMatrix.cpp copasi/elementaryFluxModes/CStepMatrix.cpp.new + mv copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + touch -r copasi/elementaryFluxModes/CSSAMethod.cpp copasi/elementaryFluxModes/CSSAMethod.cpp.new + mv copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + touch -r copasi/elementaryFluxModes/CFluxScore.cpp copasi/elementaryFluxModes/CFluxScore.cpp.new + mv copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + touch -r copasi/elementaryFluxModes/CFluxMode.cpp copasi/elementaryFluxModes/CFluxMode.cpp.new + mv copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + touch -r copasi/elementaryFluxModes/CEFMTask.cpp copasi/elementaryFluxModes/CEFMTask.cpp.new + mv copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + touch -r copasi/elementaryFluxModes/CEFMProblem.cpp copasi/elementaryFluxModes/CEFMProblem.cpp.new + mv copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + touch -r copasi/elementaryFluxModes/CEFMMethod.cpp copasi/elementaryFluxModes/CEFMMethod.cpp.new + mv copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + touch -r copasi/elementaryFluxModes/CEFMAlgorithm.cpp copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new + mv copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeNode.cpp copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTree.cpp copasi/elementaryFluxModes/CBitPatternTree.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternMethod.cpp copasi/elementaryFluxModes/CBitPatternMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + touch -r copasi/crosssection/CCrossSectionTask.cpp copasi/crosssection/CCrossSectionTask.cpp.new + mv copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + touch -r copasi/crosssection/CCrossSectionProblem.cpp copasi/crosssection/CCrossSectionProblem.cpp.new + mv copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + touch -r copasi/crosssection/CCrossSectionMethod.cpp copasi/crosssection/CCrossSectionMethod.cpp.new + mv copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + touch -r copasi/core/CRootContainer.cpp copasi/core/CRootContainer.cpp.new + mv copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + touch -r copasi/core/CRegisteredCommonName.cpp copasi/core/CRegisteredCommonName.cpp.new + mv copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + touch -r copasi/core/CObjectInterface.cpp copasi/core/CObjectInterface.cpp.new + mv copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + touch -r copasi/core/CDataTimer.cpp copasi/core/CDataTimer.cpp.new + mv copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + touch -r copasi/core/CDataString.cpp copasi/core/CDataString.cpp.new + mv copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + touch -r copasi/core/CDataObjectMap.cpp copasi/core/CDataObjectMap.cpp.new + mv copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + touch -r copasi/core/CDataObject.cpp copasi/core/CDataObject.cpp.new + mv copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + touch -r copasi/core/CDataContainer.cpp copasi/core/CDataContainer.cpp.new + mv copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + touch -r copasi/core/CDataArray.cpp copasi/core/CDataArray.cpp.new + mv copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCore.cpp.new copasi/core/CCore.cpp + touch -r copasi/core/CCore.cpp copasi/core/CCore.cpp.new + mv copasi/core/CCore.cpp.new copasi/core/CCore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + touch -r copasi/core/CCommonName.cpp copasi/core/CCommonName.cpp.new + mv copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + touch -r copasi/core/CArrayElementReference.cpp copasi/core/CArrayElementReference.cpp.new + mv copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArray.cpp.new copasi/core/CArray.cpp + touch -r copasi/core/CArray.cpp copasi/core/CArray.cpp.new + mv copasi/core/CArray.cpp.new copasi/core/CArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + touch -r copasi/compareExpressions/unittests/test_simplify.cpp copasi/compareExpressions/unittests/test_simplify.cpp.new + mv copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + touch -r copasi/compareExpressions/unittests/test_normalform.cpp copasi/compareExpressions/unittests/test_normalform.cpp.new + mv copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + touch -r copasi/compareExpressions/unittests/test_node_conversion.cpp copasi/compareExpressions/unittests/test_node_conversion.cpp.new + mv copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + touch -r copasi/compareExpressions/unittests/test_expression_comparison.cpp copasi/compareExpressions/unittests/test_expression_comparison.cpp.new + mv copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + touch -r copasi/compareExpressions/unittests/test_depth_first_iterator.cpp copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new + mv copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + touch -r copasi/compareExpressions/unittests/test_compare_utilities.cpp copasi/compareExpressions/unittests/test_compare_utilities.cpp.new + mv copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + touch -r copasi/compareExpressions/unittests/test_cnormallogical.cpp copasi/compareExpressions/unittests/test_cnormallogical.cpp.new + mv copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + touch -r copasi/compareExpressions/unittests/test_biomodels217_expression.cpp copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new + mv copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + touch -r copasi/compareExpressions/unittests/test.cpp copasi/compareExpressions/unittests/test.cpp.new + mv copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + touch -r copasi/compareExpressions/stresstest/stress_test.cpp copasi/compareExpressions/stresstest/stress_test.cpp.new + mv copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + touch -r copasi/compareExpressions/compare_utilities.cpp copasi/compareExpressions/compare_utilities.cpp.new + mv copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + touch -r copasi/compareExpressions/ConvertToCEvaluationNode.cpp copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new + mv copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + touch -r copasi/compareExpressions/CNormalTranslation.cpp copasi/compareExpressions/CNormalTranslation.cpp.new + mv copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + touch -r copasi/compareExpressions/CNormalSum.cpp copasi/compareExpressions/CNormalSum.cpp.new + mv copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + touch -r copasi/compareExpressions/CNormalProduct.cpp copasi/compareExpressions/CNormalProduct.cpp.new + mv copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + touch -r copasi/compareExpressions/CNormalLogicalItem.cpp copasi/compareExpressions/CNormalLogicalItem.cpp.new + mv copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + touch -r copasi/compareExpressions/CNormalLogical.cpp copasi/compareExpressions/CNormalLogical.cpp.new + mv copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + touch -r copasi/compareExpressions/CNormalLcm.cpp copasi/compareExpressions/CNormalLcm.cpp.new + mv copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + touch -r copasi/compareExpressions/CNormalItemPower.cpp copasi/compareExpressions/CNormalItemPower.cpp.new + mv copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + touch -r copasi/compareExpressions/CNormalItem.cpp copasi/compareExpressions/CNormalItem.cpp.new + mv copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + touch -r copasi/compareExpressions/CNormalGeneralPower.cpp copasi/compareExpressions/CNormalGeneralPower.cpp.new + mv copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + touch -r copasi/compareExpressions/CNormalFunction.cpp copasi/compareExpressions/CNormalFunction.cpp.new + mv copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + touch -r copasi/compareExpressions/CNormalFraction.cpp copasi/compareExpressions/CNormalFraction.cpp.new + mv copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + touch -r copasi/compareExpressions/CNormalChoiceLogical.cpp copasi/compareExpressions/CNormalChoiceLogical.cpp.new + mv copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + touch -r copasi/compareExpressions/CNormalChoice.cpp copasi/compareExpressions/CNormalChoice.cpp.new + mv copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + touch -r copasi/compareExpressions/CNormalCall.cpp copasi/compareExpressions/CNormalCall.cpp.new + mv copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + touch -r copasi/compareExpressions/CNormalBase.cpp copasi/compareExpressions/CNormalBase.cpp.new + mv copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + touch -r copasi/compareExpressions/CEvaluationNodeNormalizer.cpp copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new + mv copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + touch -r copasi/commandline/COptions.cpp copasi/commandline/COptions.cpp.new + mv copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + touch -r copasi/commandline/COptionParser.cpp copasi/commandline/COptionParser.cpp.new + mv copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + touch -r copasi/commandline/CLocaleString.cpp copasi/commandline/CLocaleString.cpp.new + mv copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + touch -r copasi/commandline/CConfigurationFile.cpp copasi/commandline/CConfigurationFile.cpp.new + mv copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + touch -r copasi/bindings/python/local.cpp copasi/bindings/python/local.cpp.new + mv copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + touch -r copasi/bindings/perl/local.cpp copasi/bindings/perl/local.cpp.new + mv copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + touch -r copasi/bindings/octave/local.cpp copasi/bindings/octave/local.cpp.new + mv copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + touch -r copasi/bindings/java/local.cpp copasi/bindings/java/local.cpp.new + mv copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + touch -r copasi/bindings/csharp/local.cpp copasi/bindings/csharp/local.cpp.new + mv copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + touch -r copasi/bindings/cpp_examples/runSedML/runSedML.cpp copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new + mv copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + touch -r copasi/bindings/cpp_examples/runScan/runScan.cpp copasi/bindings/cpp_examples/runScan/runScan.cpp.new + mv copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + touch -r copasi/bindings/cpp_examples/renderLayout/main.cpp copasi/bindings/cpp_examples/renderLayout/main.cpp.new + mv copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + touch -r copasi/bindings/cpp_examples/renameActiveReport/main.cpp copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new + mv copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + touch -r copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new + mv copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + touch -r copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new + mv copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + touch -r copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new + mv copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + touch -r copasi/bindings/cpp_examples/example9/example9.cpp copasi/bindings/cpp_examples/example9/example9.cpp.new + mv copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + touch -r copasi/bindings/cpp_examples/example8/example8.cpp copasi/bindings/cpp_examples/example8/example8.cpp.new + mv copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + touch -r copasi/bindings/cpp_examples/example7/example7.cpp copasi/bindings/cpp_examples/example7/example7.cpp.new + mv copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + touch -r copasi/bindings/cpp_examples/example6/example6.cpp copasi/bindings/cpp_examples/example6/example6.cpp.new + mv copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + touch -r copasi/bindings/cpp_examples/example5/example5.cpp copasi/bindings/cpp_examples/example5/example5.cpp.new + mv copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + touch -r copasi/bindings/cpp_examples/example4/example4.cpp copasi/bindings/cpp_examples/example4/example4.cpp.new + mv copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + touch -r copasi/bindings/cpp_examples/example3/example3.cpp copasi/bindings/cpp_examples/example3/example3.cpp.new + mv copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + touch -r copasi/bindings/cpp_examples/example2/example2.cpp copasi/bindings/cpp_examples/example2/example2.cpp.new + mv copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + touch -r copasi/bindings/cpp_examples/example10/example10.cpp copasi/bindings/cpp_examples/example10/example10.cpp.new + mv copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + touch -r copasi/bindings/cpp_examples/example1/example1.cpp copasi/bindings/cpp_examples/example1/example1.cpp.new + mv copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + touch -r copasi/bindings/cpp_examples/changeValues/changeValues.cpp copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new + mv copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + touch -r copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new + mv copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + touch -r copasi/bindings/cpp_examples/assignParameterSet/main.cpp copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new + mv copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + touch -r copasi/bindings/common/local_common.cpp copasi/bindings/common/local_common.cpp.new + mv copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + touch -r copasi/bindings/common/downcast_common.cpp copasi/bindings/common/downcast_common.cpp.new + mv copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + touch -r copasi/bindings/R/local.cpp copasi/bindings/R/local.cpp.new + mv copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + touch -r copasi/bindings/R/RProcessCallback.cpp copasi/bindings/R/RProcessCallback.cpp.new + mv copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + touch -r copasi/barChart/qwt3dScale.cpp copasi/barChart/qwt3dScale.cpp.new + mv copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + touch -r copasi/barChart/qwt3dPlot.cpp copasi/barChart/qwt3dPlot.cpp.new + mv copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + touch -r copasi/barChart/qwt3dColor.cpp copasi/barChart/qwt3dColor.cpp.new + mv copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + touch -r copasi/barChart/qwt3dBars.cpp copasi/barChart/qwt3dBars.cpp.new + mv copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + touch -r copasi/barChart/CQBaseWidget.cpp copasi/barChart/CQBaseWidget.cpp.new + mv copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + touch -r copasi/barChart/CQ3DBarsModifier.cpp copasi/barChart/CQ3DBarsModifier.cpp.new + mv copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + touch -r copasi/analytics/CStatistics.cpp copasi/analytics/CStatistics.cpp.new + mv copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + touch -r copasi/analytics/CAnalyticsTask.cpp copasi/analytics/CAnalyticsTask.cpp.new + mv copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + touch -r copasi/analytics/CAnalyticsProblem.cpp copasi/analytics/CAnalyticsProblem.cpp.new + mv copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + touch -r copasi/analytics/CAnalyticsMethod.cpp copasi/analytics/CAnalyticsMethod.cpp.new + mv copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + touch -r copasi/ViewCurrentUI/worker.cpp copasi/ViewCurrentUI/worker.cpp.new + mv copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + touch -r copasi/ViewCurrentUI/main.cpp copasi/ViewCurrentUI/main.cpp.new + mv copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + touch -r copasi/ViewCurrentUI/arguments.cpp copasi/ViewCurrentUI/arguments.cpp.new + mv copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + touch -r copasi/UI/qtUtilities.cpp copasi/UI/qtUtilities.cpp.new + mv copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + touch -r copasi/UI/parametertable.cpp copasi/UI/parametertable.cpp.new + mv copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + touch -r copasi/UI/objectdebug.cpp copasi/UI/objectdebug.cpp.new + mv copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + touch -r copasi/UI/listviews.cpp copasi/UI/listviews.cpp.new + mv copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + touch -r copasi/UI/copasiui3window.cpp copasi/UI/copasiui3window.cpp.new + mv copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + touch -r copasi/UI/copasiWidget.cpp copasi/UI/copasiWidget.cpp.new + mv copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + touch -r copasi/UI/TaskWidget.cpp copasi/UI/TaskWidget.cpp.new + mv copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + touch -r copasi/UI/SteadyStateWidget.cpp copasi/UI/SteadyStateWidget.cpp.new + mv copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + touch -r copasi/UI/StateSubwidget.cpp copasi/UI/StateSubwidget.cpp.new + mv copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + touch -r copasi/UI/SliderSettingsDialog.cpp copasi/UI/SliderSettingsDialog.cpp.new + mv copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + touch -r copasi/UI/SliderDialog.cpp copasi/UI/SliderDialog.cpp.new + mv copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + touch -r copasi/UI/SensitivitiesWidget.cpp copasi/UI/SensitivitiesWidget.cpp.new + mv copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + touch -r copasi/UI/SensWidgetComboBox.cpp copasi/UI/SensWidgetComboBox.cpp.new + mv copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + touch -r copasi/UI/ScanWidget.cpp copasi/UI/ScanWidget.cpp.new + mv copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + touch -r copasi/UI/ReactionsWidget1.cpp copasi/UI/ReactionsWidget1.cpp.new + mv copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + touch -r copasi/UI/ObjectBrowserWidget.cpp copasi/UI/ObjectBrowserWidget.cpp.new + mv copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + touch -r copasi/UI/ObjectBrowserItem.cpp copasi/UI/ObjectBrowserItem.cpp.new + mv copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + touch -r copasi/UI/ObjectBrowserDialog.cpp copasi/UI/ObjectBrowserDialog.cpp.new + mv copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + touch -r copasi/UI/MyLineEdit.cpp copasi/UI/MyLineEdit.cpp.new + mv copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + touch -r copasi/UI/FunctionWidget1.cpp copasi/UI/FunctionWidget1.cpp.new + mv copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + touch -r copasi/UI/DefaultplotDialog.cpp copasi/UI/DefaultplotDialog.cpp.new + mv copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + touch -r copasi/UI/DataModelGUI.cpp copasi/UI/DataModelGUI.cpp.new + mv copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + touch -r copasi/UI/CopasiSlider.cpp copasi/UI/CopasiSlider.cpp.new + mv copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + touch -r copasi/UI/CopasiFileDialog.cpp copasi/UI/CopasiFileDialog.cpp.new + mv copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + touch -r copasi/UI/CWindowInterface.cpp copasi/UI/CWindowInterface.cpp.new + mv copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + touch -r copasi/UI/CUpDownSubwidget.cpp copasi/UI/CUpDownSubwidget.cpp.new + mv copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + touch -r copasi/UI/CScanWidgetTask.cpp copasi/UI/CScanWidgetTask.cpp.new + mv copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + touch -r copasi/UI/CScanWidgetScan.cpp copasi/UI/CScanWidgetScan.cpp.new + mv copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + touch -r copasi/UI/CScanWidgetRepeat.cpp copasi/UI/CScanWidgetRepeat.cpp.new + mv copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + touch -r copasi/UI/CScanWidgetRandom.cpp copasi/UI/CScanWidgetRandom.cpp.new + mv copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + touch -r copasi/UI/CScanItemData.cpp copasi/UI/CScanItemData.cpp.new + mv copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + touch -r copasi/UI/CScanContainerWidget.cpp copasi/UI/CScanContainerWidget.cpp.new + mv copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + touch -r copasi/UI/CQValidatorUnit.cpp copasi/UI/CQValidatorUnit.cpp.new + mv copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + touch -r copasi/UI/CQValidator.cpp copasi/UI/CQValidator.cpp.new + mv copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + touch -r copasi/UI/CQUpdatesWidget.cpp copasi/UI/CQUpdatesWidget.cpp.new + mv copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + touch -r copasi/UI/CQUpdateAvogadro.cpp copasi/UI/CQUpdateAvogadro.cpp.new + mv copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + touch -r copasi/UI/CQUnitsWidget.cpp copasi/UI/CQUnitsWidget.cpp.new + mv copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + touch -r copasi/UI/CQUnitDetail.cpp copasi/UI/CQUnitDetail.cpp.new + mv copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + touch -r copasi/UI/CQUnitDM.cpp copasi/UI/CQUnitDM.cpp.new + mv copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + touch -r copasi/UI/CQUndoTester.cpp copasi/UI/CQUndoTester.cpp.new + mv copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + touch -r copasi/UI/CQTrajectoryWidget.cpp copasi/UI/CQTrajectoryWidget.cpp.new + mv copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + touch -r copasi/UI/CQTimeSeriesWidget.cpp copasi/UI/CQTimeSeriesWidget.cpp.new + mv copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + touch -r copasi/UI/CQTimeSeriesDM.cpp copasi/UI/CQTimeSeriesDM.cpp.new + mv copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + touch -r copasi/UI/CQTimeSensWidget.cpp copasi/UI/CQTimeSensWidget.cpp.new + mv copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + touch -r copasi/UI/CQThread.cpp copasi/UI/CQThread.cpp.new + mv copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + touch -r copasi/UI/CQTextDialog.cpp copasi/UI/CQTextDialog.cpp.new + mv copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + touch -r copasi/UI/CQTaskThread.cpp copasi/UI/CQTaskThread.cpp.new + mv copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + touch -r copasi/UI/CQTaskMethodWidget.cpp copasi/UI/CQTaskMethodWidget.cpp.new + mv copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + touch -r copasi/UI/CQTaskHeaderWidget.cpp copasi/UI/CQTaskHeaderWidget.cpp.new + mv copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + touch -r copasi/UI/CQTaskBtnWidget.cpp copasi/UI/CQTaskBtnWidget.cpp.new + mv copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + touch -r copasi/UI/CQTableWidget.cpp copasi/UI/CQTableWidget.cpp.new + mv copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + touch -r copasi/UI/CQTableView.cpp copasi/UI/CQTableView.cpp.new + mv copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + touch -r copasi/UI/CQTabWidget.cpp copasi/UI/CQTabWidget.cpp.new + mv copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + touch -r copasi/UI/CQTSSAWidget.cpp copasi/UI/CQTSSAWidget.cpp.new + mv copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + touch -r copasi/UI/CQTSSATimeScaleWidget.cpp copasi/UI/CQTSSATimeScaleWidget.cpp.new + mv copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + touch -r copasi/UI/CQTSSAResultWidget.cpp copasi/UI/CQTSSAResultWidget.cpp.new + mv copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + touch -r copasi/UI/CQTSSAResultSubWidget.cpp copasi/UI/CQTSSAResultSubWidget.cpp.new + mv copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + touch -r copasi/UI/CQSteadyStateResult.cpp copasi/UI/CQSteadyStateResult.cpp.new + mv copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + touch -r copasi/UI/CQStartValueReset.cpp copasi/UI/CQStartValueReset.cpp.new + mv copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + touch -r copasi/UI/CQSplashWidget.cpp copasi/UI/CQSplashWidget.cpp.new + mv copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + touch -r copasi/UI/CQSpinBoxDelegate.cpp copasi/UI/CQSpinBoxDelegate.cpp.new + mv copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + touch -r copasi/UI/CQSpeciesWidget.cpp copasi/UI/CQSpeciesWidget.cpp.new + mv copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + touch -r copasi/UI/CQSpeciesDetail.cpp copasi/UI/CQSpeciesDetail.cpp.new + mv copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + touch -r copasi/UI/CQSpecieDM.cpp copasi/UI/CQSpecieDM.cpp.new + mv copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + touch -r copasi/UI/CQSortFilterProxyModel.cpp copasi/UI/CQSortFilterProxyModel.cpp.new + mv copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + touch -r copasi/UI/CQSimpleSelectionTree.cpp copasi/UI/CQSimpleSelectionTree.cpp.new + mv copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + touch -r copasi/UI/CQSensResultWidget.cpp copasi/UI/CQSensResultWidget.cpp.new + mv copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + touch -r copasi/UI/CQScrolledDependenciesWidget.cpp copasi/UI/CQScrolledDependenciesWidget.cpp.new + mv copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + touch -r copasi/UI/CQScanWidgetParameterSet.cpp copasi/UI/CQScanWidgetParameterSet.cpp.new + mv copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + touch -r copasi/UI/CQSEDMLImportDialog.cpp copasi/UI/CQSEDMLImportDialog.cpp.new + mv copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + touch -r copasi/UI/CQSEDMLFileDialog.cpp copasi/UI/CQSEDMLFileDialog.cpp.new + mv copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + touch -r copasi/UI/CQSBMLFileDialog.cpp copasi/UI/CQSBMLFileDialog.cpp.new + mv copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + touch -r copasi/UI/CQReportsWidget.cpp copasi/UI/CQReportsWidget.cpp.new + mv copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + touch -r copasi/UI/CQReportListItem.cpp copasi/UI/CQReportListItem.cpp.new + mv copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + touch -r copasi/UI/CQReportDefinitionSelect.cpp copasi/UI/CQReportDefinitionSelect.cpp.new + mv copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + touch -r copasi/UI/CQReportDefinition.cpp copasi/UI/CQReportDefinition.cpp.new + mv copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + touch -r copasi/UI/CQReportDM.cpp copasi/UI/CQReportDM.cpp.new + mv copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + touch -r copasi/UI/CQReactionsWidget.cpp copasi/UI/CQReactionsWidget.cpp.new + mv copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + touch -r copasi/UI/CQReactionDM.cpp copasi/UI/CQReactionDM.cpp.new + mv copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + touch -r copasi/UI/CQPushButtonDelegate.cpp copasi/UI/CQPushButtonDelegate.cpp.new + mv copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + touch -r copasi/UI/CQProgressItemText.cpp copasi/UI/CQProgressItemText.cpp.new + mv copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + touch -r copasi/UI/CQProgressItemBar.cpp copasi/UI/CQProgressItemBar.cpp.new + mv copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + touch -r copasi/UI/CQProgressItem.cpp copasi/UI/CQProgressItem.cpp.new + mv copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + touch -r copasi/UI/CQProgressDialog.cpp copasi/UI/CQProgressDialog.cpp.new + mv copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + touch -r copasi/UI/CQPreferenceDialog.cpp copasi/UI/CQPreferenceDialog.cpp.new + mv copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + touch -r copasi/UI/CQPlotsWidget.cpp copasi/UI/CQPlotsWidget.cpp.new + mv copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + touch -r copasi/UI/CQPlotDM.cpp copasi/UI/CQPlotDM.cpp.new + mv copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + touch -r copasi/UI/CQParameterSetsWidget.cpp copasi/UI/CQParameterSetsWidget.cpp.new + mv copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + touch -r copasi/UI/CQParameterSetsDM.cpp copasi/UI/CQParameterSetsDM.cpp.new + mv copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + touch -r copasi/UI/CQParameterResultItemModel.cpp copasi/UI/CQParameterResultItemModel.cpp.new + mv copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + touch -r copasi/UI/CQParameterOverviewWidget.cpp copasi/UI/CQParameterOverviewWidget.cpp.new + mv copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + touch -r copasi/UI/CQParameterOverviewDM.cpp copasi/UI/CQParameterOverviewDM.cpp.new + mv copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + touch -r copasi/UI/CQParameterGroupView.cpp copasi/UI/CQParameterGroupView.cpp.new + mv copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + touch -r copasi/UI/CQParameterGroupDM.cpp copasi/UI/CQParameterGroupDM.cpp.new + mv copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + touch -r copasi/UI/CQParameterEstimationResult.cpp copasi/UI/CQParameterEstimationResult.cpp.new + mv copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + touch -r copasi/UI/CQOscillationTaskWidget.cpp copasi/UI/CQOscillationTaskWidget.cpp.new + mv copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + touch -r copasi/UI/CQOptimizationWidget.cpp copasi/UI/CQOptimizationWidget.cpp.new + mv copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + touch -r copasi/UI/CQOptimizationResult.cpp copasi/UI/CQOptimizationResult.cpp.new + mv copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + touch -r copasi/UI/CQOptPopulation.cpp copasi/UI/CQOptPopulation.cpp.new + mv copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + touch -r copasi/UI/CQNotes.cpp copasi/UI/CQNotes.cpp.new + mv copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + touch -r copasi/UI/CQNameSelectionDialog.cpp copasi/UI/CQNameSelectionDialog.cpp.new + mv copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + touch -r copasi/UI/CQMultipleSelectionDialog.cpp copasi/UI/CQMultipleSelectionDialog.cpp.new + mv copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + touch -r copasi/UI/CQMoietiesTaskWidget.cpp copasi/UI/CQMoietiesTaskWidget.cpp.new + mv copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + touch -r copasi/UI/CQMoietiesTaskResult.cpp copasi/UI/CQMoietiesTaskResult.cpp.new + mv copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + touch -r copasi/UI/CQModelWidget.cpp copasi/UI/CQModelWidget.cpp.new + mv copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + touch -r copasi/UI/CQModelValue.cpp copasi/UI/CQModelValue.cpp.new + mv copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + touch -r copasi/UI/CQMmlScrollView.cpp copasi/UI/CQMmlScrollView.cpp.new + mv copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + touch -r copasi/UI/CQMessageBox.cpp copasi/UI/CQMessageBox.cpp.new + mv copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + touch -r copasi/UI/CQMergingData.cpp copasi/UI/CQMergingData.cpp.new + mv copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + touch -r copasi/UI/CQMatrixDialog.cpp copasi/UI/CQMatrixDialog.cpp.new + mv copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + touch -r copasi/UI/CQMathMatrixWidget.cpp copasi/UI/CQMathMatrixWidget.cpp.new + mv copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + touch -r copasi/UI/CQMCAWidget.cpp copasi/UI/CQMCAWidget.cpp.new + mv copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + touch -r copasi/UI/CQLyapWidget.cpp copasi/UI/CQLyapWidget.cpp.new + mv copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + touch -r copasi/UI/CQLyapResultWidget.cpp copasi/UI/CQLyapResultWidget.cpp.new + mv copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + touch -r copasi/UI/CQLayoutsWidget.cpp copasi/UI/CQLayoutsWidget.cpp.new + mv copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + touch -r copasi/UI/CQLayoutsDM.cpp copasi/UI/CQLayoutsDM.cpp.new + mv copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + touch -r copasi/UI/CQLNAWidget.cpp copasi/UI/CQLNAWidget.cpp.new + mv copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + touch -r copasi/UI/CQGlobalQuantityDM.cpp copasi/UI/CQGlobalQuantityDM.cpp.new + mv copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + touch -r copasi/UI/CQGlobalQuantitiesWidget.cpp copasi/UI/CQGlobalQuantitiesWidget.cpp.new + mv copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + touch -r copasi/UI/CQFunctionsWidget.cpp copasi/UI/CQFunctionsWidget.cpp.new + mv copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + touch -r copasi/UI/CQFunctionDM.cpp copasi/UI/CQFunctionDM.cpp.new + mv copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + touch -r copasi/UI/CQFluxModeDM.cpp copasi/UI/CQFluxModeDM.cpp.new + mv copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + touch -r copasi/UI/CQFittingWidget.cpp copasi/UI/CQFittingWidget.cpp.new + mv copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + touch -r copasi/UI/CQFittingResultTab1.cpp copasi/UI/CQFittingResultTab1.cpp.new + mv copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + touch -r copasi/UI/CQFittingResult.cpp copasi/UI/CQFittingResult.cpp.new + mv copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + touch -r copasi/UI/CQFittingItemWidget.cpp copasi/UI/CQFittingItemWidget.cpp.new + mv copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + touch -r copasi/UI/CQExpressionWidget.cpp copasi/UI/CQExpressionWidget.cpp.new + mv copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + touch -r copasi/UI/CQExpressionMmlStackedWidget.cpp copasi/UI/CQExpressionMmlStackedWidget.cpp.new + mv copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + touch -r copasi/UI/CQExperimentSelection.cpp copasi/UI/CQExperimentSelection.cpp.new + mv copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + touch -r copasi/UI/CQExperimentData.cpp copasi/UI/CQExperimentData.cpp.new + mv copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + touch -r copasi/UI/CQExpandModelData.cpp copasi/UI/CQExpandModelData.cpp.new + mv copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + touch -r copasi/UI/CQEventsWidget.cpp copasi/UI/CQEventsWidget.cpp.new + mv copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + touch -r copasi/UI/CQEventWidget1.cpp copasi/UI/CQEventWidget1.cpp.new + mv copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + touch -r copasi/UI/CQEventDM.cpp copasi/UI/CQEventDM.cpp.new + mv copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + touch -r copasi/UI/CQEFMWidget.cpp copasi/UI/CQEFMWidget.cpp.new + mv copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + touch -r copasi/UI/CQEFMSpeciesDM.cpp copasi/UI/CQEFMSpeciesDM.cpp.new + mv copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + touch -r copasi/UI/CQEFMResultWidget.cpp copasi/UI/CQEFMResultWidget.cpp.new + mv copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + touch -r copasi/UI/CQEFMReactionDM.cpp copasi/UI/CQEFMReactionDM.cpp.new + mv copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + touch -r copasi/UI/CQEFMNetReactionDM.cpp copasi/UI/CQEFMNetReactionDM.cpp.new + mv copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + touch -r copasi/UI/CQEFMListWidget.cpp copasi/UI/CQEFMListWidget.cpp.new + mv copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + touch -r copasi/UI/CQDifferentialEquations.cpp copasi/UI/CQDifferentialEquations.cpp.new + mv copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + touch -r copasi/UI/CQDependencyWidget.cpp copasi/UI/CQDependencyWidget.cpp.new + mv copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + touch -r copasi/UI/CQDependencyDialog.cpp copasi/UI/CQDependencyDialog.cpp.new + mv copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + touch -r copasi/UI/CQDependenciesWidget.cpp copasi/UI/CQDependenciesWidget.cpp.new + mv copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + touch -r copasi/UI/CQDateTimeEditDelegate.cpp copasi/UI/CQDateTimeEditDelegate.cpp.new + mv copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + touch -r copasi/UI/CQCrossSectionTaskWidget.cpp copasi/UI/CQCrossSectionTaskWidget.cpp.new + mv copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + touch -r copasi/UI/CQCopasiApplication.cpp copasi/UI/CQCopasiApplication.cpp.new + mv copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + touch -r copasi/UI/CQCompartmentsWidget.cpp copasi/UI/CQCompartmentsWidget.cpp.new + mv copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + touch -r copasi/UI/CQCompartmentDM.cpp copasi/UI/CQCompartmentDM.cpp.new + mv copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + touch -r copasi/UI/CQCompartmentCopyOptions.cpp copasi/UI/CQCompartmentCopyOptions.cpp.new + mv copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + touch -r copasi/UI/CQCompartment.cpp copasi/UI/CQCompartment.cpp.new + mv copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + touch -r copasi/UI/CQComboDelegate.cpp copasi/UI/CQComboDelegate.cpp.new + mv copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + touch -r copasi/UI/CQCheckModelWindow.cpp copasi/UI/CQCheckModelWindow.cpp.new + mv copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + touch -r copasi/UI/CQBrowserPaneDM.cpp copasi/UI/CQBrowserPaneDM.cpp.new + mv copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + touch -r copasi/UI/CQBrowserPane.cpp copasi/UI/CQBrowserPane.cpp.new + mv copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + touch -r copasi/UI/CQBaseTreeDataModel.cpp copasi/UI/CQBaseTreeDataModel.cpp.new + mv copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + touch -r copasi/UI/CQBaseDataModel.cpp copasi/UI/CQBaseDataModel.cpp.new + mv copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + touch -r copasi/UI/CQArrayAnnotationsWidgetDM.cpp copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new + mv copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + touch -r copasi/UI/CQArrayAnnotationsWidget.cpp copasi/UI/CQArrayAnnotationsWidget.cpp.new + mv copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + touch -r copasi/UI/CQAnalyticsWidget.cpp copasi/UI/CQAnalyticsWidget.cpp.new + mv copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + touch -r copasi/UI/CProvenanceDialog.cpp copasi/UI/CProvenanceDialog.cpp.new + mv copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + touch -r copasi/UI/CProgressBar.cpp copasi/UI/CProgressBar.cpp.new + mv copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + touch -r copasi/UI/CMCAResultWidget.cpp copasi/UI/CMCAResultWidget.cpp.new + mv copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + touch -r copasi/UI/CMCAResultSubwidget.cpp copasi/UI/CMCAResultSubwidget.cpp.new + mv copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + touch -r copasi/UI/CLNAResultWidget.cpp copasi/UI/CLNAResultWidget.cpp.new + mv copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + touch -r copasi/UI/CLNAResultSubwidget.cpp copasi/UI/CLNAResultSubwidget.cpp.new + mv copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + touch -r copasi/UI/CEntityProvenanceDialog.cpp copasi/UI/CEntityProvenanceDialog.cpp.new + mv copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + touch -r copasi/UI/CCopasiSelectionWidget.cpp copasi/UI/CCopasiSelectionWidget.cpp.new + mv copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + touch -r copasi/UI/CCopasiSelectionDialog.cpp copasi/UI/CCopasiSelectionDialog.cpp.new + mv copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlotSelectionDialog.cpp copasi/UI/CCopasiPlotSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlot2YSelectionDialog.cpp copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + touch -r copasi/UI/CColorScale.cpp copasi/UI/CColorScale.cpp.new + mv copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + touch -r copasi/UI/AboutDialog.cpp copasi/UI/AboutDialog.cpp.new + mv copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + touch -r copasi/Provenance/CProvenanceXMLWriter.cpp copasi/Provenance/CProvenanceXMLWriter.cpp.new + mv copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + touch -r copasi/OpenMP/CRandomContext.cpp copasi/OpenMP/CRandomContext.cpp.new + mv copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + touch -r copasi/OpenMP/CMathContext.cpp copasi/OpenMP/CMathContext.cpp.new + mv copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + touch -r copasi/OpenMP/CContext.cpp copasi/OpenMP/CContext.cpp.new + mv copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + touch -r copasi/MIRIAMUI/CQReferenceDM.cpp copasi/MIRIAMUI/CQReferenceDM.cpp.new + mv copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeViewItem.cpp copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeView.cpp copasi/MIRIAMUI/CQRDFTreeView.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + touch -r copasi/MIRIAMUI/CQModifiedDM.cpp copasi/MIRIAMUI/CQModifiedDM.cpp.new + mv copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + touch -r copasi/MIRIAMUI/CQMiriamWidget.cpp copasi/MIRIAMUI/CQMiriamWidget.cpp.new + mv copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + touch -r copasi/MIRIAMUI/CQCreatorDM.cpp copasi/MIRIAMUI/CQCreatorDM.cpp.new + mv copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + touch -r copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new + mv copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + touch -r copasi/MIRIAM/CReference.cpp copasi/MIRIAM/CReference.cpp.new + mv copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + touch -r copasi/MIRIAM/CRaptorInit.cpp copasi/MIRIAM/CRaptorInit.cpp.new + mv copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + touch -r copasi/MIRIAM/CRDFWriter.cpp copasi/MIRIAM/CRDFWriter.cpp.new + mv copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + touch -r copasi/MIRIAM/CRDFUtilities.cpp copasi/MIRIAM/CRDFUtilities.cpp.new + mv copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + touch -r copasi/MIRIAM/CRDFTriplet.cpp copasi/MIRIAM/CRDFTriplet.cpp.new + mv copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + touch -r copasi/MIRIAM/CRDFSubject.cpp copasi/MIRIAM/CRDFSubject.cpp.new + mv copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + touch -r copasi/MIRIAM/CRDFPredicate.cpp copasi/MIRIAM/CRDFPredicate.cpp.new + mv copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + touch -r copasi/MIRIAM/CRDFParser.cpp copasi/MIRIAM/CRDFParser.cpp.new + mv copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + touch -r copasi/MIRIAM/CRDFObject.cpp copasi/MIRIAM/CRDFObject.cpp.new + mv copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + touch -r copasi/MIRIAM/CRDFNode.cpp copasi/MIRIAM/CRDFNode.cpp.new + mv copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + touch -r copasi/MIRIAM/CRDFLiteral.cpp copasi/MIRIAM/CRDFLiteral.cpp.new + mv copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + touch -r copasi/MIRIAM/CRDFGraphConverter.cpp copasi/MIRIAM/CRDFGraphConverter.cpp.new + mv copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + touch -r copasi/MIRIAM/CRDFGraph.cpp copasi/MIRIAM/CRDFGraph.cpp.new + mv copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + touch -r copasi/MIRIAM/CModified.cpp copasi/MIRIAM/CModified.cpp.new + mv copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + touch -r copasi/MIRIAM/CModelMIRIAMInfo.cpp copasi/MIRIAM/CModelMIRIAMInfo.cpp.new + mv copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + touch -r copasi/MIRIAM/CMIRIAMResource.cpp copasi/MIRIAM/CMIRIAMResource.cpp.new + mv copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + touch -r copasi/MIRIAM/CCreator.cpp copasi/MIRIAM/CCreator.cpp.new + mv copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + touch -r copasi/MIRIAM/CConstants.cpp copasi/MIRIAM/CConstants.cpp.new + mv copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + touch -r copasi/MIRIAM/CBiologicalDescription.cpp copasi/MIRIAM/CBiologicalDescription.cpp.new + mv copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + touch -r copasi/CopasiUI/main.cpp copasi/CopasiUI/main.cpp.new + mv copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + touch -r copasi/CopasiSE/CopasiSE.cpp copasi/CopasiSE/CopasiSE.cpp.new + mv copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + touch -r copasi/CopasiSBW/SBWTranslator.cpp copasi/CopasiSBW/SBWTranslator.cpp.new + mv copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + touch -r copasi/CopasiDataModel/CInfo.cpp copasi/CopasiDataModel/CInfo.cpp.new + mv copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + touch -r copasi/CopasiDataModel/CDataModel.cpp copasi/CopasiDataModel/CDataModel.cpp.new + mv copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + touch -r copasi/ABiochem/wattstrog.cpp copasi/ABiochem/wattstrog.cpp.new + mv copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + touch -r copasi/ABiochem/clo.cpp copasi/ABiochem/clo.cpp.new + mv copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + touch -r copasi/ABiochem/abiochem.cpp copasi/ABiochem/abiochem.cpp.new + mv copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + touch -r copasi/ABiochem/ab.cpp copasi/ABiochem/ab.cpp.new + mv copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + touch -r copasi/ABiochem/Erdos.cpp copasi/ABiochem/Erdos.cpp.new + mv copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + touch -r copasi/ABiochem/CGene.cpp copasi/ABiochem/CGene.cpp.new + mv copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + touch -r copasi/ABiochem/1d.cpp copasi/ABiochem/1d.cpp.new + mv copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + echo 'Patch #0 (COPASI-fix_install_libpaths.patch):' Patch #0 (COPASI-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 879 (offset 36 lines). patching file copasi/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 164 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 158 (offset 5 lines). Hunk #2 succeeded at 175 (offset 5 lines). patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 163 (offset -2 lines). patching file copasi/bindings/java/CMakeLists.txt Hunk #1 succeeded at 159 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/octave/CMakeLists.txt Hunk #1 succeeded at 153 (offset 6 lines). + echo 'Patch #4 (COPASI-fix_exe_permissions.patch):' Patch #4 (COPASI-fix_exe_permissions.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_exe_permissions --fuzz=0 patching file copasi/CopasiSE/CMakeLists.txt patching file copasi/CopasiUI/CMakeLists.txt Hunk #1 succeeded at 122 (offset 13 lines). Patch #6 (COPASI-libCombine_paths.patch): + echo 'Patch #6 (COPASI-libCombine_paths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .libCombine_paths --fuzz=0 patching file CMakeModules/FindLIBCOMBINE.cmake Hunk #3 succeeded at 147 (offset 25 lines). + echo 'Patch #7 (COPASI-find_crossguid2.patch):' Patch #7 (COPASI-find_crossguid2.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_crossguid2 --fuzz=0 patching file CMakeModules/FindCROSSGUID.cmake Hunk #2 succeeded at 35 (offset 1 line). Hunk #3 succeeded at 54 (offset 2 lines). Hunk #4 succeeded at 86 (offset 3 lines). Patch #8 (COPASI-use_c++17.patch): + echo 'Patch #8 (COPASI-use_c++17.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .use_c++17 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 129 (offset 11 lines). Patch #9 (COPASI-find_libsedml.patch): + echo 'Patch #9 (COPASI-find_libsedml.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_libsedml --fuzz=0 patching file CMakeModules/FindLIBSEDML.cmake Patch #10 (COPASI-find_sbw.patch): + echo 'Patch #10 (COPASI-find_sbw.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_sbw --fuzz=0 patching file CMakeModules/FindSBW.cmake + echo 'Patch #12 (COPASI-find_raptor.patch):' Patch #12 (COPASI-find_raptor.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .find_raptor --fuzz=0 patching file CMakeModules/FindRAPTOR.cmake Patch #13 (COPASI-qwt62.patch): + echo 'Patch #13 (COPASI-qwt62.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .qwt --fuzz=0 patching file copasi/plotUI/C2DCurveData.h patching file copasi/plotUI/C2DPlotCurve.h patching file copasi/plotUI/CBandedGraphData.h patching file copasi/plotUI/CHistoCurveData.h patching file copasi/plotUI/CLinearColorMap.h patching file copasi/plotUI/CPlotSpectogram.h patching file copasi/plotUI/CQwtPlot.cpp patching file copasi/plotUI/CQwtPlot.h patching file copasi/plotUI/CSpectorgramData.h patching file copasi/plotUI/scrollzoomer.cpp patching file copasi/plotUI/scrollzoomer.h + echo 'Patch #14 (COPASI-4.41.283-fix_missing_header.patch):' Patch #14 (COPASI-4.41.283-fix_missing_header.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/plotUI/CQMarchingSquares.cpp Patch #15 (COPASI-find_qcp_libs.patch): + echo 'Patch #15 (COPASI-find_qcp_libs.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file CMakeModules/FindQCP.cmake Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch): + echo 'Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/bindings/common/downcast_common.cpp Patch #11 (COPASI-porting_to_python310.patch): + echo 'Patch #11 (COPASI-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 156 (offset 3 lines). Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch): + echo 'Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file CMakeModules/FindQWT.cmake Hunk #1 succeeded at 19 (offset -5 lines). Hunk #2 succeeded at 30 (offset -5 lines). patching file CMakeModules/FindMML.cmake + sed -e 's|@@libdir@@|/usr/lib64|g' -i CMakeModules/FindQWT.cmake Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch): + echo 'Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .QWTPLOT3D_QT5 --fuzz=0 patching file CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_includedir@@|/usr/include/qt5/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_libdir@@|/usr/lib64|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@_libmml_includedir@@|/usr/include/qt5/libmml-qt5|g' -i CMakeModules/FindMML.cmake + sed -e 's|@@_libmml_libdir@@|/usr/lib64|g' -i CMakeModules/FindMML.cmake + sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp + sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.2YObeB + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=4.42.284 -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.13.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DENABLE_JIT:BOOL=OFF -DSELECT_QT=Qt5 -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG' -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=/usr/lib64/cmake '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake-qt5 -DQWT_VERSION_STRING:STRING=6.2.0 -DQWT_LIBRARY:FILEPATH=/usr/lib64/libqwt-qt5.so -DQWT_INCLUDE_DIR:PATH=/usr/include/qt5/qwt -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON -DMML_INCLUDE_DIR:PATH=/usr/include/qt5/libmml-qt5 -DMML_LIBRARY:FILEPATH=/usr/lib64/libmml.so -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic -DBLAS_blas_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DLAPACK_lapack_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DCROSSGUID_INCLUDE_DIR:PATH=/usr/include/crossguid2 -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON -DLIBSBML_INCLUDE_DIR:PATH=/usr/include/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBNUML_LIBRARY:FILEPATH=/usr/lib64/libnuml.so -DEXTRA_INCLUDE_DIRS:STRING=-I/usr/include/numl -DEXPAT_LIBRARY:FILEPATH=/usr/lib64/libexpat.so -DEXPAT_INCLUDE_DIR:PATH=/usr/include -DF2C_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DENABLE_GPROF:BOOL=OFF -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=/usr/bin/bison -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCOPASI_USE_QCUSTOMPLOT:BOOL=ON CMake Warning: No source or binary directory provided. Both will be assumed to be the same as the current working directory, but note that this warning will become a fatal error in future CMake releases. -- The C compiler identification is GNU 14.0.1 -- The CXX compiler identification is GNU 14.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for strptime -- Looking for strptime - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of size_t -- Check size of size_t - done -- Performing Test EXPAT_EXPAT_TEST -- Performing Test EXPAT_EXPAT_TEST - Success -- Found EXPAT: /usr/lib64/libexpat.so (found version "2.6.0") -- Found LIBSBML: sbml -- Found LIBSEDML: /lib64/libsedml.so (found version "2.0.32") -- Found LIBCOMBINE: /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat (found version "0.2.20") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Found BISON: /usr/bin/bison (found version "3.8.2") -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- Found CLAPACK: /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so -- Found PkgConfig: /usr/bin/pkg-config (found version "2.1.0") -- Found LIBUUID: /usr/lib64/libuuid.so (found version "2.40.0") -- Found CROSSGUID: /usr/include/crossguid2 -- Found RAPTOR: /usr/lib64/libraptor.so (found version "1.4.21") -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found QCP: /usr/lib64/libqcustomplot-qt5.so -- Using Qt5 -- Found QWT: /usr/lib64/libqwt-qt5.so -- Found MML: /usr/lib64/libmml.so -- Found SBW: //usr/lib64/libSBW.so -- Found SWIG: /usr/bin/swig (found version "4.2.1") -- Mocing with options: -DWITH_TIME_SENS=1;-DWITH_QT5_VISUALIZATION=1;-DCOPASI_SBW_INTEGRATION=1;-DCOPASI_BANDED_GRAPH=1;-DCOPASI_NONLIN_DYN_OSCILLATION=1;-DQT_USE_TEXTBROWSER=1;-DCOPASI_USE_QWT=1;-DCOPASI_USE_QCUSTOMPLOT=1;-DQWT_VERSION=0x060200 -- Mocing files for subdir: barChart -- Mocing files for subdir: layoutUI -- Mocing files for subdir: MIRIAMUI -- Mocing files for subdir: plotUI -- Mocing files for subdir: tex -- Mocing files for subdir: UI -- Mocing files for subdir: wizard -- Mocing files for subdir: qlayout -- Mocing files for subdir: undoFramework -- Mocing files for subdir: undoUI -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /lib64/libz.so (found version "1.3.0.zlib-ng") -- Found PythonInterp: /usr/bin/python3 (found version "3.13") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.0a5") -- Found Python: /usr/bin/python3.13 (found version "3.13.0") found components: Interpreter -- ----------------------------------------------------------- Building COPASI 4.42.284 (Release) Source Dir = /builddir/build/BUILD/COPASI-Build-284 Binary Dir = /builddir/build/BUILD/COPASI-Build-284 Install Prefix = /usr Dependencies: Vendor = Generic LAPACK Libs = /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so LAPACK LDFLAGS = crossguid Libs = /lib64/libcrossguid2.so;/usr/lib64/libuuid.so cross include = /usr/include/crossguid2 Expat version = 2.6.0 Expat Libs = /usr/lib64/libexpat.so Expat include = /usr/include Raptor version = 1.4.21 Raptor Libs = /usr/lib64/libraptor.so Raptor include = /usr/include libSBML version = libSBML lib = /usr/lib64/libsbml.so libSBML include = /usr/include/sbml Qt version = 5.15.12 Qt lib = Qt5::Concurrent;Qt5::Core;Qt5::Gui;Qt5::Widgets;Qt5::Network;Qt5::OpenGL;Qt5::PrintSupport;Qt5::Svg;Qt5::Xml;Qt5::DataVisualization Qt include = /usr/include/qt5/;/usr/include/qt5/QtConcurrent;/usr/include/qt5/QtCore;/usr/lib64/qt5//mkspecs/linux-g++;/usr/include/qt5/QtGui;/usr/include/qt5/QtWidgets;/usr/include/qt5/QtNetwork;/usr/include/qt5/QtOpenGL;/usr/include/qt5/QtPrintSupport;/usr/include/qt5/QtSvg;/usr/include/qt5/QtXml;/usr/include/qt5/QtDataVisualization QWT version = 6.2.0 (0x60200) QWT lib = /usr/lib64/libqwt-qt5.so QWT include = /usr/include/qt5/qwt qwtplot3d lib = qwtplot3d include = qtmml lib = /usr/lib64/libmml.so qtmml include = /usr/include/qt5/libmml-qt5 SBW version = SBW lib = //usr/lib64/libSBW.so SBW include = /usr/include libSEDML version = 2.0.32 libSEDML lib = /lib64/libsedml.so libSEDML include = /usr/include Combine version = 0.2.20 Combine lib = /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat Combine include = /usr/include NativeJIT lib = NativeJIT include = NativeJIT CXX Flags = cpu_features lib = cpu_features include = OpenMP Libs = OpenMP CXX Flags = Options: COPASI_EXTUNIT = ON SBW integration = ON Model Merging = ON SEDML support = ON Combine Archive support = ON SDE support = ON GPROF support = OFF UNDO framework = ON Versioning framework = OFF Provenance framework = OFF Analytics Task = OFF Time Sensitivities task = ON JIT Compilation = OFF OpenMP = OFF CXX Flags = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC Additional Defines = Linux;HAVE_F2C_H;LINUX Language Bindings: SWIG = /usr/bin/swig .NET Bindings = OFF Java Bindings = OFF Python Bindings = ON Perl Bindings = OFF Octave Bindings = OFF R Bindings = OFF Building: COPASI SE = ON COPASI UI = ON C++ Examples = OFF SBML TestRunner = OFF Franks TestRunner = OFF Semantic Testsuite = OFF Stochastic Testsuite = OFF Steady State TestRunner = OFF MCA TestRunner = OFF ----------------------------------------------------------- -- Configuring done (2.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP COPASI_OVERWRITE_USE_LAPACK CSHARP_COMPILER ENABLE_COPASI_SEDML ENABLE_USE_MATH_CONTAINER ENABLE_USE_SBMLUNIT ENABLE_WITH_MERGEMODEL QT_QMAKE_EXECUTABLE SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/COPASI-Build-284 + /usr/bin/cmake --build . -j4 --verbose Change Dir: '/builddir/build/BUILD/COPASI-Build-284' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/COPASI-Build-284 -B/builddir/build/BUILD/COPASI-Build-284 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles /builddir/build/BUILD/COPASI-Build-284//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-core.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Nothing to be done for 'copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Built target binding_python_swig gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CConstants.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:7: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:452:56: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 452 | static_cast< CTrajectoryTask * >(&mData.pTaskList->operator[]("Time-Course"))->load(inbuf); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::openCombineArchive(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2222:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2222 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2249:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2249 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2266:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2266 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2071:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2071 | bool result = true; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::importSEDML(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2395:17: warning: unused variable ‘pSEDMLDocument’ [-Wunused-variable] 2395 | SedDocument * pSEDMLDocument = NULL; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2399:18: warning: unused variable ‘pSBMLDocument’ [-Wunused-variable] 2399 | SBMLDocument * pSBMLDocument = NULL; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2400:20: warning: unused variable ‘pLol’ [-Wunused-variable] 2400 | CListOfLayouts * pLol = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2401:29: warning: unused variable ‘pLotList’ [-Wunused-variable] 2401 | COutputDefinitionVector * pLotList = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::exportSEDML(const std::string&, bool, int, int, bool, bool, CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2593:17: warning: unused variable ‘pOrigSEDMLDocument’ [-Wunused-variable] 2593 | SedDocument * pOrigSEDMLDocument = NULL; | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:434:1: warning: when initialized here [-Wreorder] 434 | CMIRIAMResource::CMIRIAMResource(const std::string & name, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:446:1: warning: when initialized here [-Wreorder] 446 | CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:458:1: warning: when initialized here [-Wreorder] 458 | CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup & group, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraphConverter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFLiteral.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFNode.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFObject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFParser.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFPredicate.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFSubject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFTriplet.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFUtilities.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRaptorInit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp: In member function ‘char* CRDFWriter::write(const CRDFGraph*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp:99:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 99 | bool success = true; | ^~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArrayElementReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCommonName.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp: In member function ‘void CDataObjectMap::objectRenamed(CDataObject*, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp:301:16: warning: unused variable ‘success’ [-Wunused-variable] 301 | bool success = (itMap->second.erase(pObject) > 0); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRegisteredCommonName.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CLocaleString.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:114:1: warning: when initialized here [-Wreorder] 114 | CConfigurationFile::CConfigurationFile(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const CConfigurationFile&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:148:1: warning: when initialized here [-Wreorder] 148 | CConfigurationFile::CConfigurationFile(const CConfigurationFile & src, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h: In constructor ‘CRootContainer::CRootContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:75:23: warning: ‘CRootContainer::mpUnitDefinitionList’ will be initialized after [-Wreorder] 75 | CUnitDefinitionDB * mpUnitDefinitionList; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:73:23: warning: ‘CConfigurationFile* CRootContainer::mpConfiguration’ [-Wreorder] 73 | CConfigurationFile* mpConfiguration; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:38:1: warning: when initialized here [-Wreorder] 38 | CRootContainer::CRootContainer(const bool & withGUI): | ^~~~~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptionParser.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalBase.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalCall.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoiceLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFraction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFunction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalGeneralPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItemPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLcm.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogicalItem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:39:16: required from here 39 | copySetOfSets(src.mChoices, this->mChoices); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:41:16: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 41 | copySetOfSets(src.mAndSets, this->mAndSets); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:216:18: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 216 | copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:494:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 494 | copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp: In copy constructor ‘CNormalProduct::CNormalProduct(const CNormalProduct&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp:73:12: warning: unused variable ‘result’ [-Wunused-variable] 73 | bool result = this->mItemPowers.insert(pDestItemPower).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp: In copy constructor ‘CNormalSum::CNormalSum(const CNormalSum&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:93:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 93 | bool tmpRes = mProducts.insert(new CNormalProduct(*pTmpProduct)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:102:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 102 | bool tmpRes = mFractions.insert(new CNormalFraction(**it2)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CNormalFraction* CNormalTranslation::normAndSimplifyReptdly(const CEvaluationNode*, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:175:20: warning: unused variable ‘pFraction’ [-Wunused-variable] 175 | CNormalFraction* pFraction = dynamic_cast(base0); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CEvaluationNode* CNormalTranslation::newCancel(const CEvaluationNode*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:4076:34: warning: unused variable ‘pChild2’ [-Wunused-variable] 4076 | const CEvaluationNode* pChild2 = dynamic_cast(pChild1->getSibling()); | ^~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2637:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 2637 | CNormalLogical::copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2647:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 2647 | CNormalLogical::copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:27: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘bool contains_necessary_mass_action_elements(const CDataVector&, const CNormalProduct*, const CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:1226:25: warning: unused variable ‘pDatamodel’ [-Wunused-variable] 1226 | const CDataModel* pDatamodel = dynamic_cast(pModel->getObjectParent()); | ^~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCrossSectionProblem&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp:95:21: warning: unused variable ‘pDataModel’ [-Wunused-variable] 95 | const CDataModel* pDataModel = o.getObjectDataModel(); | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘normalize_variable_names(CNormalBase*, std::map, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:266:54: warning: ‘this’ pointer is null [-Wnonnull] 266 | normalize_variable_names(&pChoice->getCondition(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:46:21: note: in a call to non-static member function ‘CNormalChoice::getCondition()’ 46 | CNormalLogical& getCondition(); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:267:59: warning: ‘this’ pointer is null [-Wnonnull] 267 | normalize_variable_names(&pChoice->getTrueExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:49:22: note: in a call to non-static member function ‘CNormalChoice::getTrueExpression()’ 49 | CNormalFraction& getTrueExpression(); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:268:60: warning: ‘this’ pointer is null [-Wnonnull] 268 | normalize_variable_names(&pChoice->getFalseExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:52:22: note: in a call to non-static member function ‘CNormalChoice::getFalseExpression()’ 52 | CNormalFraction& getFalseExpression(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxScore.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrix.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrixColumn.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauLine.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CZeroSet.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationParser_yacc.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationLexer_lex.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from CEvaluationParser.ypp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /raid/shoops/git/COPASI/copasi/function/CEvaluationLexer.lpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::setCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:171:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 171 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::addCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:217:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 217 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp: In member function ‘CEvaluationNode* CDerive::deriveBranch(const CEvaluationNode*, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:508:25: warning: unused variable ‘tmpFunction’ [-Wunused-variable] 508 | const CFunction * tmpFunction = dynamic_cast(pENCall->getCalledTree()); | ^~~~~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp: In member function ‘bool CEvaluationNode::operator<(const CEvaluationNode&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:861:10: warning: enumeration value ‘UNIT’ not handled in switch [-Wswitch] 861 | switch (mainType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:617: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp: In member function ‘virtual ASTNode* CEvaluationNodeConstant::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 238 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:276: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:271: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual ASTNode* CEvaluationNodeFunction::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1079 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual std::string CEvaluationNodeFunction::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1507 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In constructor ‘CEvaluationNodeLogical::CEvaluationNodeLogical(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 53 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CIssue CEvaluationNodeLogical::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 123 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::getUnit(const CMathContainer&, const std::vector&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 422 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::setUnit(const CMathContainer&, const std::map&, std::map&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 458 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeLogical::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 553 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:492:10: warning: unused variable ‘i’ [-Wunused-variable] 492 | size_t i = 0; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:668: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In constructor ‘CEvaluationNodeNumber::CEvaluationNodeNumber(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 51 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In member function ‘virtual ASTNode* CEvaluationNodeNumber::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 240 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:275: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In constructor ‘CEvaluationNodeObject::CEvaluationNodeObject(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 61 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual CIssue CEvaluationNodeObject::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 130 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual const CCopasiNode >::Data& CEvaluationNodeObject::getData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 332 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual std::string CEvaluationNodeObject::getInfix(const std::vector >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 358 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘void CEvaluationNodeObject::setObjectValuePtr(double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 554 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeOperator::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | size_t i = 0, iMax = children.size(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual ASTNode* CEvaluationNodeOperator::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 508 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1503: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual std::string CEvaluationNodeOperator::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1515 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp: In constructor ‘CEvaluationNodeStructure::CEvaluationNodeStructure(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 40 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:118: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp: In member function ‘void CExpression::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:61:22: warning: unused variable ‘pObject’ [-Wunused-variable] 61 | CObjectInterface * pObject = | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:227: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/fstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/copasi.h:55, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In member function ‘bool CEvaluationTree::setTree(const ASTNode&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:635:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 635 | switch (TargetType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:619:20: warning: unused variable ‘pErrorNode’ [-Wunused-variable] 619 | CEvaluationNode *pErrorNode = NULL; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In static member function ‘static CEvaluationNode* CEvaluationTree::fromAST(const ASTNode*, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] 684 | switch (itNode->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParameters(const CFunctionParameters&, std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1197:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1197 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParametersActualValues(std::vector&, const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1229:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1229 | switch (role) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp: In member function ‘size_t CFunctionParameters::findParameterByName(const std::string&, const CFunctionParameter**) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:199:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 199 | if (ppFunctionParameter != NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:195:10: warning: unused variable ‘imax’ [-Wunused-variable] 195 | size_t imax = mParameters.size(); | ^~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CAbstractLayoutInterface.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:151: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLColorDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStop.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStops.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImage.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp: In member function ‘RenderGroup* CLGroup::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:884:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 884 | int result; | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImageTexturizer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLinearGradient.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* CLLocalRenderInformation::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:201:11: warning: unused variable ‘result’ [-Wunused-variable] 201 | int result = pLRI->addStyle(pStyle); | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRadialGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRelAbsVector.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCubicBezier.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderPoint.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp: In member function ‘void CLRenderInformationBase::addSBMLAttributes(RenderInformationBase*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:439:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 439 | int result; | ^~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLUnresolvedReferenceException.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutEngine.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp: In static member function ‘static CLayout* SBMLDocumentLoader::createLayout(const Layout&, const std::map, std::__cxx11::basic_string >&, std::map, std::__cxx11::basic_string >&, const std::map, std::__cxx11::basic_string >&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:272:10: warning: unused variable ‘count’ [-Wunused-variable] 272 | size_t count = idToKeyMap.size() + globalIdToKeyMap.size(); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp: In member function ‘int CLNAMethod::calculateCovarianceMatrixReduced()’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:303:21: warning: unused variable ‘pJacobian’ [-Wunused-variable] 303 | const C_FLOAT64 * pJacobian = mJacobianReduced.array(); | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:91:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 91 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:9: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:315:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 315 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer(CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:417:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 417 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createSynchronizeInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2581:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2581 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createApplyInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2720:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2720 | switch (pObject->getSimulationType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp: In member function ‘std::string CMathDependencyGraph::getDOTNodeId(const CObjectInterface*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘Noise’ not handled in switch [-Wswitch] 651 | switch (pMathObject->getValueType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘ParticleNoise’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘TransitionTime’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNodeIterator.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEnum.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp: In member function ‘void CMathDerive::initOneVar(size_t, size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:41:16: warning: unused variable ‘pVMO’ [-Wunused-variable] 41 | CMathObject* pVMO = mpContainer->getMathObject(&mpContainer->getValues()[var]); | ^~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp: In static member function ‘static CEvaluationNode* CMathEvent::CTrigger::compileLE(const CEvaluationNode*, const std::vector&, const CMath::Variables&, CRootProcessor*&, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 979 | switch (pTriggerNode->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h: In copy constructor ‘CMathEventQueue::CAction::CAction(const CMathEventQueue::CAction&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:190:23: warning: ‘CMathEventQueue::CAction::mpPriority’ will be initialized after [-Wreorder] 190 | const C_FLOAT64 * mpPriority; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:185:26: warning: ‘CVector CMathEventQueue::CAction::mValues’ [-Wreorder] 185 | CVector< C_FLOAT64 > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:85:1: warning: when initialized here [-Wreorder] 85 | CMathEventQueue::CAction::CAction(const CAction & src): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp: In constructor ‘CMathEventQueue::CAction::CAction(CMathEvent*, CMathEventQueue*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:103:10: warning: enumeration value ‘Stop’ not handled in switch [-Wswitch] 103 | switch (pEvent->getType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathHistory.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_construct.h:61, from /usr/include/c++/14/bits/stl_tempbuf.h:61, from /usr/include/c++/14/memory:66, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:18: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp: In member function ‘virtual CIssue CMathExpression::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 285 | switch ((*it)->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::compile(CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] 643 | switch (mValueType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createIntensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1833:22: warning: unused variable ‘pNumber’ [-Wunused-variable] 1833 | CObjectInterface * pNumber = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1834:22: warning: unused variable ‘pCompartment’ [-Wunused-variable] 1834 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createExtensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1868:22: warning: variable ‘pIntensiveValue’ set but not used [-Wunused-but-set-variable] 1868 | CObjectInterface * pIntensiveValue = NULL; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1869:22: warning: variable ‘pCompartment’ set but not used [-Wunused-but-set-variable] 1869 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_yacc.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_lex.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp: In member function ‘void CAnnotation::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:160:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 160 | switch (type) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp: In static member function ‘static void CMMLOutput::writeDifferentialEquations(std::ostream&, CModel*, bool, bool, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:284:8: warning: variable ‘hasContents’ set but not used [-Wunused-but-set-variable] 284 | bool hasContents = false; | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp: In member function ‘CReactionResult CModelAnalyzer::checkReaction(const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:196:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 196 | switch (role) | ^ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:61: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h: In constructor ‘CModel::CModel(CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1220:86: warning: ‘CModel::mReactionsPerSpecies’ will be initialized after [-Wreorder] 1220 | std::map < const CMetab *, std::set< std::pair< const CReaction *, C_FLOAT64 > > > mReactionsPerSpecies; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: warning: ‘CDataVectorN CModel::mValues’ [-Wreorder] 1205 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:202:1: warning: when initialized here [-Wreorder] 202 | CModel::CModel(CDataContainer* pParent): | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘bool CModel::handleUnusedMetabolites()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:928:23: warning: variable ‘pStoiEnd’ set but not used [-Wunused-but-set-variable] 928 | C_FLOAT64 * pStoi, *pStoiEnd, *pRowEnd; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2579: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In function ‘const CObjectInterface* getDependentOrNull(const std::map&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 2598 | if (it->second == index) return it->first; | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2618:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: 2618 | const CFitTask* task = dynamic_cast(&dataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘void CModel::updateInitialValues(std::set&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:3439:8: warning: unused variable ‘success’ [-Wunused-variable] 3439 | bool success = compileIfNecessary(NULL); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In member function ‘virtual CUndoObjectInterface* CModelParameterSet::insert(const CData&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:84:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 84 | switch (CModelParameter::TypeNames.toEnum(data.getProperty(CData::OBJECT_TYPE).toString(), CModelParameter::Type::unknown)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 150 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:139:1: warning: when initialized here [-Wreorder] 139 | CModelParameterSet::CModelParameterSet(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const CModelParameterSet&, const CDataContainer*, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 185 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelParameterSet::CModelParameterSet(const CModelParameterSet & src, | ^~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const std::string&, const CDataContainer*, const std::string&, const CFlags&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelEntity::CModelEntity(const std::string & name, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const CModelEntity&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:200:1: warning: when initialized here [-Wreorder] 200 | CModelEntity::CModelEntity(const CModelEntity & src, | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp: In member function ‘void CMoiety::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:122:17: warning: unused variable ‘pObject’ [-Wunused-variable] 122 | CDataObject * pObject = addObjectReference("Amount", mIAmount, CDataObject::ValueDbl); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp: In member function ‘std::string CReaction::getReactionScheme() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:2314:15: warning: unused variable ‘pModel’ [-Wunused-variable] 2314 | CDataModel* pModel = getObjectDataModel(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘CUndoData CReactionInterface::createUndoData(const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:454:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 454 | switch (framework) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:508:27: warning: unused variable ‘pObject’ [-Wunused-variable] 508 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:568:27: warning: unused variable ‘pObject’ [-Wunused-variable] 568 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::vector > CReactionInterface::getUnitVector(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1295:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1295 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getUnit(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1347:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1347 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getEffectiveKineticLawUnit() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘Default’ not handled in switch [-Wswitch] 1683 | switch (getEffectiveKineticLawUnitType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CInternalSolver.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODA.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODAR.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/Cxerrwd.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/common.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In member function ‘int CRadau5::operator()(int*, evalF, double*, double*, double*, double*, double*, double*, int*, evalJ, int*, int*, int*, evalM, int*, int*, int*, evalO, int*, double*, int*, int*, int*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:127:17: warning: unused variable ‘io___10’ [-Wunused-variable] 127 | static cilist io___10 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:128:17: warning: unused variable ‘io___12’ [-Wunused-variable] 128 | static cilist io___12 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:129:17: warning: unused variable ‘io___15’ [-Wunused-variable] 129 | static cilist io___15 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:130:17: warning: unused variable ‘io___17’ [-Wunused-variable] 130 | static cilist io___17 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:131:17: warning: unused variable ‘io___19’ [-Wunused-variable] 131 | static cilist io___19 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:132:17: warning: unused variable ‘io___24’ [-Wunused-variable] 132 | static cilist io___24 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:133:17: warning: unused variable ‘io___29’ [-Wunused-variable] 133 | static cilist io___29 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:134:17: warning: unused variable ‘io___31’ [-Wunused-variable] 134 | static cilist io___31 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:135:17: warning: unused variable ‘io___33’ [-Wunused-variable] 135 | static cilist io___33 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:136:17: warning: unused variable ‘io___36’ [-Wunused-variable] 136 | static cilist io___36 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:137:17: warning: unused variable ‘io___39’ [-Wunused-variable] 137 | static cilist io___39 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:138:17: warning: unused variable ‘io___43’ [-Wunused-variable] 138 | static cilist io___43 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:139:17: warning: unused variable ‘io___50’ [-Wunused-variable] 139 | static cilist io___50 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:140:17: warning: unused variable ‘io___52’ [-Wunused-variable] 140 | static cilist io___52 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:141:17: warning: unused variable ‘io___68’ [-Wunused-variable] 141 | static cilist io___68 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:142:17: warning: unused variable ‘io___72’ [-Wunused-variable] 142 | static cilist io___72 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In function ‘int radcor_(int*, CRadau5::evalF, double*, double*, double*, double*, double*, double*, double*, int*, CRadau5::evalJ, int*, int*, int*, CRadau5::evalM, int*, int*, CRadau5::evalO, int*, int*, int*, double*, double*, double*, double*, double*, double*, int*, int*, long int*, int*, int*, int*, long int*, double*, double*, int*, int*, int*, long int*, long int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, double*, int*, int*, int*, int*, int*, int*, int*, double*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1071:20: warning: variable ‘index1’ set but not used [-Wunused-but-set-variable] 1071 | static C_LOGICAL index1, index2, index3, caljac; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1107:17: warning: unused variable ‘io___176’ [-Wunused-variable] 1107 | static cilist io___176 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1108:17: warning: unused variable ‘io___177’ [-Wunused-variable] 1108 | static cilist io___177 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1109:17: warning: unused variable ‘io___178’ [-Wunused-variable] 1109 | static cilist io___178 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1110:17: warning: unused variable ‘io___179’ [-Wunused-variable] 1110 | static cilist io___179 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1111:17: warning: unused variable ‘io___180’ [-Wunused-variable] 1111 | static cilist io___180 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1112:17: warning: unused variable ‘io___181’ [-Wunused-variable] 1112 | static cilist io___181 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1113:17: warning: unused variable ‘io___182’ [-Wunused-variable] 1113 | static cilist io___182 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:53:14: warning: ‘c__3’ defined but not used [-Wunused-variable] 53 | static C_INT c__3 = 3; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:52:14: warning: ‘c__5’ defined but not used [-Wunused-variable] 52 | static C_INT c__5 = 5; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:51:14: warning: ‘c__1’ defined but not used [-Wunused-variable] 51 | static C_INT c__1 = 1; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:50:14: warning: ‘c__9’ defined but not used [-Wunused-variable] 50 | static C_INT c__9 = 9; | ^~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dbnorm.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dc_decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dcfode.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dewset.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dfnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dintdy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dmnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dprja.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/drcheck.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dsolsy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dstoda.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In destructor ‘CRandomContext::~CRandomContext()’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:17:1: warning: label ‘Base’ defined but not used [-Wunused-label] 17 | Base: master() = NULL; | ^~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In member function ‘void CRandomContext::init(CRandom::Type, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:28:1: warning: label ‘Base’ defined but not used [-Wunused-label] 28 | Base: master() = NULL; | ^~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9831:3: warning: "/*" within comment [-Wcomment] 9831 | /* ret_val = i1mach_(&mdperm[*k - 1]); */ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘doublereal d1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:391:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 391 | fprintf(stderr, "invalid argument: d1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int da7sst_(integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:1090:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1090 | if (v[6] > 0. && v[6] <= emax || v[6] == 0. && v[7] == 0.) | ~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dg7itb_(doublereal*, doublereal*, doublereal*, integer*, integer*, integer*, integer*, integer*, doublereal*, doublereal*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:2092:41: warning: variable ‘rstrst’ set but not used [-Wunused-but-set-variable] 2092 | static integer td1, tg1, lstgst, pp1, rstrst; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dparck_(integer*, doublereal*, integer*, integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6647:15: warning: unused variable ‘vn’ [-Wunused-variable] 6647 | static char vn[4 * 2 * 34] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6663:15: warning: unused variable ‘varnm’ [-Wunused-variable] 6663 | static char varnm[1 * 2] = ""; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6664:15: warning: unused variable ‘sh’ [-Wunused-variable] 6664 | static char sh[1 * 2] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9778:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 9778 | fprintf(stderr, "invalid argument: i1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i7mdcn_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9833:43: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 9833 | ret_val = i1mach_(&mdperm[(0 + (0 + (*k - 1 << 2))) / 4]); | ~~~^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogEntry.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp: In member function ‘void COptItem::updatePrerequisites(const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:503:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 503 | std::vector< COptItem * >::const_iterator it = influencingIntervals.begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:504:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 504 | std::vector< COptItem * >::const_iterator end = influencingIntervals.end(); | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogItem.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp: In member function ‘virtual bool COptMethodLevenbergMarquardt::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:132:28: warning: variable ‘nrhs’ set but not used [-Wunused-but-set-variable] 132 | C_INT dim, starts, info, nrhs; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:107: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 107 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:120: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 120 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:201: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 201 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:342: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 342 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:626: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 626 | #pragma omp parallel for schedule(runtime) /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 646 | #pragma omp parallel for schedule(runtime) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp: In member function ‘bool COptMethodPS::reachedStdDeviation()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:482:15: warning: unused variable ‘pEnd’ [-Wunused-variable] 482 | C_FLOAT64 * pEnd = pValue + mPopulationSize; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp: In member function ‘virtual bool COptMethodPraxis::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:99:13: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 99 | C_FLOAT64 tmp = 0.0; | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:100:13: warning: variable ‘machep’ set but not used [-Wunused-but-set-variable] 100 | C_FLOAT64 machep, stepmx, d1, d2; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp: In member function ‘bool COptMethodSS::combination()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:820:13: warning: variable ‘la’ set but not used [-Wunused-but-set-variable] 820 | C_FLOAT64 la; // for orders of magnitude | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:827:22: warning: variable ‘xprval’ set but not used [-Wunused-but-set-variable] 827 | C_FLOAT64 xnewval, xprval; // to hold temp value of "parent" in go-beyond strategy | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp: In member function ‘virtual bool COptMethodStatistics::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:93:8: warning: variable ‘Continue’ set but not used [-Wunused-but-set-variable] 93 | bool Continue = true; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp: In member function ‘int COptMethodTruncatedNewton::sFun(int*, double*, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:328:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 328 | for (size_t i = 0; i < mVariableSize; i++, g++) | ~~^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:84:1: warning: when initialized here [-Wreorder] 84 | COptProblem::COptProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const COptProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:129:1: warning: when initialized here [-Wreorder] 129 | COptProblem::COptProblem(const COptProblem & src, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual void COptProblem::calculateValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:184:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 184 | std::vector< COptItem * >::const_iterator it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:185:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 185 | std::vector< COptItem * >::const_iterator end = mpOptItems->end(); | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘double COptProblem::evalMinimizeIntervals(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:826:23: warning: unused variable ‘SQRT_EPSILON’ [-Wunused-variable] 826 | static const double SQRT_EPSILON = sqrt(std::numeric_limits< double >::epsilon()); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual bool COptProblem::setSolution(const double&, const CVector&, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1014 | if (variables.size() != 0) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘double CPraxis::operator()(double, double, int, int, double*, FPraxis*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:1097:11: warning: variable ‘seed’ set but not used [-Wunused-but-set-variable] 1097 | C_INT32 seed; | ^~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘CPraxis::minfit(int, double, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:337:11: warning: ‘f’ may be used uninitialized [-Wmaybe-uninitialized] 337 | if (0.0 <= f) | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:236:13: note: ‘f’ was declared here 236 | C_FLOAT64 f; | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.h:53, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqn_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:387:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 387 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:391:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 391 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:401:27: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 401 | C_FLOAT64 gnorm, ftest, fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqnbc_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, double*, double*, int*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:761:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 761 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:766:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 766 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:777:13: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 777 | C_FLOAT64 fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In function ‘int initp3_(double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:2398:13: warning: variable ‘cond’ set but not used [-Wunused-but-set-variable] 2398 | C_FLOAT64 cond; | ^~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/FminBrent.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentFileInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp: In member function ‘double CExperiment::getErrorMeanSD(const CObjectInterface*, const double&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:1673:20: warning: unused variable ‘pScale’ [-Wunused-variable] 1673 | const C_FLOAT64 *pScale = mScale.array() + it->second; | ^~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:342:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 342 | pTasks = dynamic_cast *>(getObjectAncestor("Vector")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual bool CFitProblem::calculate()’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1046:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1046 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1094:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1094 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1195:34: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 1195 | auto it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual void CFitProblem::updateContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1333:17: warning: variable ‘pExp’ set but not used [-Wunused-but-set-variable] 1333 | CExperiment * pExp = NULL; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotColors.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CPermutation.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CRandom.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cmt19937.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cr250.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CKeyFactory.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In constructor ‘CDataHandler::CDataHandler(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In copy constructor ‘CDataHandler::CDataHandler(const CDataHandler&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp: In member function ‘virtual void CDataHandler::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:171:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 171 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:723:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 723 | CCopasiTask * pTask = &pDataModel->getTaskList()->operator[]("Parameter Estimation"); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportBody.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp: In member function ‘virtual void CReport::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp:136:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 136 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h: In constructor ‘CReportDefinition::CReportDefinition(const CReportDefinition&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:68:20: warning: ‘CReportDefinition::mPrecision’ will be initialized after [-Wreorder] 68 | unsigned C_INT32 mPrecision; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:60:38: warning: ‘std::vector CReportDefinition::mHeaderVector’ [-Wreorder] 60 | std::vector mHeaderVector; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:143:1: warning: when initialized here [-Wreorder] 143 | CReportDefinition::CReportDefinition(const CReportDefinition & src, | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static REACTION_TYPE CCellDesignerImporter::reactionTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4866:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4866 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_LINK_TYPE CCellDesignerImporter::modificationLinkTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4954:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4954 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_TYPE CCellDesignerImporter::modificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:5022:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 5022 | bool status; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:80: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static SPECIES_MODIFICATION_TYPE CCellDesignerImporter::speciesModificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:10901:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 10901 | bool status; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:97: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/ConverterASTNode.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In function ‘void addSymbolComponentToUnitDefinition(UnitDefinition*, CUnit::SymbolComponent&, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3109:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3109 | if (unitKind != C_INVALID_INDEX && use_d_prefix) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3114:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3114 | if (unitKind == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘void CSBMLExporter::addInitialAssignmentsToModel(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3397:11: warning: unused variable ‘result’ [-Wunused-variable] 3397 | int result = model->addParameter(param); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘bool CSBMLExporter::createSBMLDocument(CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3741:15: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 3741 | int result; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In static member function ‘static XMLNode* CSBMLExporter::createSBMLNotes(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8125:31: warning: unused variable ‘tmp’ [-Wunused-variable] 8125 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", prefix); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8191:27: warning: unused variable ‘tmp’ [-Wunused-variable] 8191 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", ""); | ^~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLIncompatibility.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:72: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLReference.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:79: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:81: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:84: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:34: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:100: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:101: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::replaceAmountReferences(ConverterASTNode*, Model*, double, std::map&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:3620:43: warning: variable ‘pSpecies’ set but not used [-Wunused-but-set-variable] 3620 | ASTNode *pAvogadro = NULL, *pSpecies = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::applyConversionFactors()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:7861:25: warning: variable ‘pE’ set but not used [-Wunused-but-set-variable] 7861 | const CChemEqElement* pE = NULL; | ^~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::importUnitsFromSBMLDocument(Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:172:24: warning: unused variable ‘pUDef’ [-Wunused-variable] 172 | UnitDefinition * pUDef = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::checkElementUnits(const Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1042:8: warning: variable ‘inconsistentDimensionlessUnits’ set but not used [-Wunused-but-set-variable] 1042 | bool inconsistentDimensionlessUnits = false; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1043:8: warning: unused variable ‘defaultVolumeUsed’ [-Wunused-variable] 1043 | bool defaultVolumeUsed = false; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1044:8: warning: unused variable ‘defaultAreaUsed’ [-Wunused-variable] 1044 | bool defaultAreaUsed = false; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1045:8: warning: unused variable ‘defaultLengthUsed’ [-Wunused-variable] 1045 | bool defaultLengthUsed = false; | ^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUtils.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/StdException.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunit.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunitInterface.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMMLUnits.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘bool CScanMethod::loop(size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:574:10: warning: unused variable ‘failCounter’ [-Wunused-variable] 574 | size_t failCounter = 0; | ^~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘CScanItemRandom::step()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:388:22: warning: ‘Value’ may be used uninitialized [-Wmaybe-uninitialized] 388 | *mpObjectValue = Value; | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:339:13: note: ‘Value’ was declared here 339 | C_FLOAT64 Value; | ^~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:92:34: required from here 92 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp: In member function ‘bool CScanTask::processCallback()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 201 | if (success && !mOutputInSubtask) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:261:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: 261 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:492:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 492 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp: In member function ‘bool CSensMethod::initialize(CSensProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:484:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 484 | switch (mpProblem->getSubTaskType()) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CEigen.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:322:34: required from here 322 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleTargetFunctions(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 504 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleVariables(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:572:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 572 | switch (type) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp: In member function ‘virtual bool CSensTask::process(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:106:17: warning: unused variable ‘pProblem’ [-Wunused-variable] 106 | CSensProblem* pProblem = | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘void CMCAMethod::calculateUnscaledElasticities(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:226:32: warning: unused variable ‘TransientDependencies’ [-Wunused-variable] 226 | const CMathDependencyGraph & TransientDependencies = mpContainer->getTransientDependencies(); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:229:17: warning: unused variable ‘pParticleFluxObjectEnd’ [-Wunused-variable] 229 | CMathObject * pParticleFluxObjectEnd = pParticleFluxObject + numReacs; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:231:17: warning: unused variable ‘pSpeciesObjectEnd’ [-Wunused-variable] 231 | CMathObject * pSpeciesObjectEnd = pSpeciesObjectStart + numMetabs; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::calculateUnscaledConcentrationCC()’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:330:9: warning: unused variable ‘N’ [-Wunused-variable] 330 | C_INT N = (C_INT) aux2.numRows(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::scaleMCA(const bool&, double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:394:10: warning: unused variable ‘numReacs’ [-Wunused-variable] 394 | size_t numReacs = mpContainer->getParticleFluxes().size(); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:103:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 103 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:235: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:54:1: warning: when initialized here [-Wreorder] 54 | CNewtonMethod::CNewtonMethod(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CNewtonMethod&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CNewtonMethod::CNewtonMethod(const CNewtonMethod & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘std::string CNewtonMethod::targetValueToString() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 685 | switch (mTargetCriterion) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:905:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: 905 | dynamic_cast< CTrajectoryTask * >(&pDataModel->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘virtual bool CNewtonMethod::initialize(const CSteadyStateProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:858:23: warning: variable ‘pTrajectoryMethod’ set but not used [-Wunused-but-set-variable] 858 | CTrajectoryMethod * pTrajectoryMethod = NULL; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp: In member function ‘virtual void CTimeSensLsodaMethod::start()’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:565:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 565 | for (i = mSystemSize + 1; i < mData.dim; ++i) | ~~^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:153:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 153 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp: In member function ‘void CHybridMethod::calculateDerivative(CVectorCore&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:330:11: warning: unused variable ‘bal’ [-Wunused-variable] 330 | C_INT32 bal = 0; | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CHybridMethodODE45::CHybridMethodODE45(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:141:1: warning: when initialized here [-Wreorder] 141 | CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45 & src, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp: In member function ‘virtual void CHybridNextReactionRKMethod::integrateDeterministicPart(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:93:22: warning: unused variable ‘react’ [-Wunused-variable] 93 | CHybridStochFlag * react = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:827:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 827 | */ | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:578:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 578 | */ | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:820:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 820 | */ | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRootFinder.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:28:1: warning: when initialized here [-Wreorder] 28 | CLsodaMethod2::CLsodaMethod2(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:61:1: warning: when initialized here [-Wreorder] 61 | CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2 & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp: In member function ‘virtual CTrajectoryMethod::Status CLsodaMethod2::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:150:13: warning: unused variable ‘StartTime’ [-Wunused-variable] 150 | C_FLOAT64 StartTime = mTime; | ^~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::doOneStep()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:431:10: warning: unused variable ‘s’ [-Wunused-variable] 431 | size_t s = mStage - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::setInitialStepSize()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:710:13: warning: unused variable ‘absT’ [-Wunused-variable] 710 | C_FLOAT64 absT = fabs(mTLeft); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::checkRoots()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:802:15: warning: unused variable ‘pLeftRoots’ [-Wunused-variable] 802 | C_FLOAT64 * pLeftRoots = mRootValuesLeft; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:805:15: warning: unused variable ‘pRightRoots’ [-Wunused-variable] 805 | C_FLOAT64 * pRightRoots = mRootValueRight; | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp: In member function ‘bool CTauLeapMethod::updateSystem()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:365:21: warning: unused variable ‘pKEnd’ [-Wunused-variable] 365 | const C_FLOAT64 * pKEnd = pK + mNumReactions; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp: In member function ‘virtual bool CTimeSeries::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:181:14: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 181 | switch (pObject->getSimulationType()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:70:1: warning: when initialized here [-Wreorder] 70 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA & src, | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:48:1: warning: when initialized here [-Wreorder] 48 | CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:71:1: warning: when initialized here [-Wreorder] 71 | CTrajectoryProblem::CTrajectoryProblem(const CDataContainer * pParent): | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:94:1: warning: when initialized here [-Wreorder] 94 | CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem & src, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:193:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 193 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/locale:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:611:104: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 611 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:73:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 73 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:71:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 71 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp: In member function ‘int CCSPMethod::isBlockDiagonal(int, int, const CMatrix&, const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:15: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:21: warning: variable ‘jmax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:27: warning: variable ‘imaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:34: warning: variable ‘jmaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘virtual void CILDMMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:108:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 108 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:223:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 223 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘void CILDMMethod::deuflhard(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:886:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 886 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:1029:13: warning: variable ‘max1’ set but not used [-Wunused-but-set-variable] 1029 | C_FLOAT64 max1; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘virtual void CILDMModifiedMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:117:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 117 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:179:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 179 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:224:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 224 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::deuflhard_metab(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:508:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 508 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_new(int*, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:620:25: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 620 | C_INT nrhs, ok, fast, flag_newton; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_for_timestep(int, double&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:848:27: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 848 | C_INT i, iter, itermax, flag_newton; | ^~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_mod_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:407:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 407 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:465:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 465 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space_thomas(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:523:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 523 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::sylvester(int, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:1645:9: warning: variable ‘flag_sylvester’ set but not used [-Wunused-but-set-variable] 1645 | C_INT flag_sylvester; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:827:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 827 | */ | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:578:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 578 | */ | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:820:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 820 | */ | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator==(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:322:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 322 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator!=(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 362 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::allocateData(const Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:416:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 416 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::deleteData()’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:466:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 466 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::assignData(const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:510:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 510 | switch (rhs.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:626:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 626 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::istream& operator>>(std::istream&, CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:707:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 707 | switch (i.mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoObjectInterface.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoStack.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_yacc.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘void CUndoData::CChangeSet::add(const CUndoData::ChangeInfo&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:67:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 67 | switch (Info.type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CUndoObjectInterface*, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:207:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 207 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CData&, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:252:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 252 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:320:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 320 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:354:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 354 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::isSetProperty(const std::string&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 422 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::apply(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:555:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 555 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::undo(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:577:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 577 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectDisplayName() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:649:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 649 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:666:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 666 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectType() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:696:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 696 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::operator<(const CUndoData&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:715:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 715 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:753:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 753 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘const CData& CUndoData::getData(const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:977:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 977 | switch (mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_lex.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBaseUnit.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBrent.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiException.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual CData CCopasiParameter::toData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:105:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 105 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual void CCopasiParameter::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:185:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 185 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCopasiParameter&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:419:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 419 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::createValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:534:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 534 | switch (mType) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::assignValidValues(const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:596:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 596 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValue(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:661:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 661 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::assignValue(const Type&, void*&, const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:713:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 713 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValidValues(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:807:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 807 | switch (type) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp: In member function ‘virtual void CCopasiParameterGroup::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp:236:22: warning: unused variable ‘pParameter’ [-Wunused-variable] 236 | CCopasiParameter * pParameter; | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h: In constructor ‘CCopasiTask::CCopasiTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:522:24: warning: ‘CCopasiTask::mInitialState’ will be initialized after [-Wreorder] 522 | CVector< C_FLOAT64 > mInitialState; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:516:20: warning: ‘CMathContainer* CCopasiTask::mpContainer’ [-Wreorder] 516 | CMathContainer * mpContainer; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:232:1: warning: when initialized here [-Wreorder] 232 | CCopasiTask::CCopasiTask() | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp: In member function ‘virtual void CCopasiTask::separate(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:654:12: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 654 | switch (activity) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTaskStatus.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDependencyGraph.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDirEntry.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CIndexedPriorityQueue.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLeastSquareSolution.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp: In static member function ‘static std::string CExpressionGenerator::generate(Operation, const std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for (int i = 1; i < objects.size(); ++i) | ~~^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CFlags.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.h:83, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.h:13, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h: In instantiation of ‘std::vector CEnumAnnotation::annotations() const [with Type = std::__cxx11::basic_string; Enum = CExpressionGenerator::Operation]’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:71:36: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: 71 | return OperationNames.annotations(); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: warning: loop variable ‘a’ of type ‘const std::pair, CExpressionGenerator::Operation>&’ binds to a temporary constructed from type ‘const std::pair, CExpressionGenerator::Operation>’ [-Wrange-loop-construct] 114 | for (const std::pair< Type, Enum > & a : mMap) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: note: use non-reference type ‘const std::pair, CExpressionGenerator::Operation>’ to make the copy explicit or ‘const std::pair, CExpressionGenerator::Operation>&’ to prevent copying In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::create(const CTaskEnum::Task&, const CTaskEnum::Method&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 80 | switch (methodType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::copy(const CCopasiMethod*, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 288 | switch (pSrc->getSubType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:193:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 193 | for (size_t i = 0; i < taskList.size(); i++) /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp: In static member function ‘static FittingItem* ResultParser::parseItem(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:481:16: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 481 | if (firstLeq == -1) | ~~~~~~~~~^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:488:14: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 488 | if (square == -1) | ~~~~~~~^~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CReadConfig.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTableCell.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskEnum.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitComponent.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp: In member function ‘virtual bool CUnitDefinitionDB::add(const CUnitDefinition&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:43:21: warning: variable ‘pCopy’ set but not used [-Wunused-but-set-variable] 43 | CUnitDefinition * pCopy = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h: In constructor ‘CUnitParserBase::CUnitParserBase()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:81:20: warning: ‘CUnitParserBase::mPosition’ will be initialized after [-Wreorder] 81 | unsigned C_INT32 mPosition; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:80:10: warning: ‘CUnit* CUnitParserBase::mpUnit’ [-Wreorder] 80 | CUnit *mpUnit; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CUnitParserBase::CUnitParserBase(): | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CVersion.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::add(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:277:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 277 | switch (issue.getSeverity()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::remove(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:316:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 316 | switch (issue.getSeverity()) | ^ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CluX.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/Cmd5.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CopasiTime.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/dgemm.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CExpat.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp: In function ‘ISODateTime[abi:cxx11](tm*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:24: warning: ‘%.02d’ directive writing between 2 and 11 bytes into a region of size between 8 and 18 [-Wformat-overflow=] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:20: note: directive argument in the range [-2147483647, 2147483647] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:28: In function ‘sprintf’, inlined from ‘ISODateTime[abi:cxx11](tm*)’ at /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:14: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 17 and 72 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:69: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:304:7: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 304 | pdelete(mpTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp: In member function ‘bool CCopasiXML::saveModel()’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:1042:28: warning: unused variable ‘pDataModel’ [-Wunused-variable] 1042 | CDataModel * pDataModel = Assignments.getObjectDataModel(); | ^~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/BoundingBoxHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:79:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 79 | mpData->pTaskList->clear(); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:181:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 181 | mpData->pFunctionList->getIndex("Objective Function") != C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp: In member function ‘CXMLHandler* CXMLHandlerFactory::createHandler(const CXMLHandler::Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘AFTER’ not handled in switch [-Wswitch] 137 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint1’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Body’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘CurveSegment’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘DelayExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘End’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Expression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Footer’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Header’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘InitialExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘NoiseExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Position’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘PriorityExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Problem’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Start’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Text’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘TriggerExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Unit’ not handled in switch [-Wswitch] [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CallParameterHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ChannelSpecHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CharacterDataHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CommentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CubicBezierHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CurveHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/DimensionsHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GUIHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:96:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 96 | Index = mpData->pFunctionList->getIndex(Name); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ImageHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/InitialStateHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineSegmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfLayoutsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MathMLHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MethodHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MiriamAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterTextHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotItemHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PointHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveElementHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportSectionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportTargetHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SliderHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateVariableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TableHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UNKNOWNHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:66:52: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 66 | mpData->pCurrentTask = CTaskFactory::create(Type, mpData->pTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnsupportedAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:410:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 410 | CScanTask* pTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Scan")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createScanTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:450:8: warning: unused variable ‘result’ [-Wunused-variable] 450 | bool result = exportNthScanItem(pProblem, numItems - 1, task); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createSteadyStateTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:638:23: warning: unused variable ‘tProblem’ [-Wunused-variable] 638 | CTrajectoryProblem* tProblem = static_cast(pTask->getProblem()); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In static member function ‘static std::string CSEDMLExporter::getParameterValueAsString(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:49: warning: second operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:58: warning: third operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:68: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static const CDataObject* SEDMLUtils::resolveVariable(CModel*, const SedVariable*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:337:25: warning: unused variable ‘pReaction’ [-Wunused-variable] 337 | const CReaction * pReaction = dynamic_cast< const CReaction * >(obj); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static int SEDMLUtils::getAlphaFromRgba(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:665:7: warning: unused variable ‘offset’ [-Wunused-variable] 665 | int offset = rgba[0] == '#' ? 1 : 0; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:168:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 168 | if (pTaskList->getIndex("Time-Course") == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp: In member function ‘void SEDMLImporter::importOutputs()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:465:18: warning: unused variable ‘logX’ [-Wunused-variable] 465 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:466:18: warning: unused variable ‘logY’ [-Wunused-variable] 466 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:499:18: warning: unused variable ‘logX’ [-Wunused-variable] 499 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:500:18: warning: unused variable ‘logY’ [-Wunused-variable] 500 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:424:46: warning: unused variable ‘copasiMap’ [-Wunused-variable] 424 | std::map< const CDataObject *, SBase * > & copasiMap = pModel->getObjectDataModel()->getCopasi2SBMLMap(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:426:29: warning: unused variable ‘pReports’ [-Wunused-variable] 426 | CReportDefinitionVector * pReports = mpDataModel->getReportDefinitionList(); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h: In constructor ‘VariableInfo::VariableInfo(const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:74:23: warning: ‘VariableInfo::mpObject’ will be initialized after [-Wreorder] 74 | const CDataObject * mpObject; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:72:8: warning: ‘bool VariableInfo::mIsValid’ [-Wreorder] 72 | bool mIsValid; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:808:1: warning: when initialized here [-Wreorder] 808 | VariableInfo::VariableInfo(const CDataObject * pObject) | ^~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-core /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi 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autodoc,1 -o /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/python.i gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Generating wizard/ui_wizard.h [ 36%] Building CXX object copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o 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-I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -MF CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o.d -o CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp [ 36%] Building CXX object copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -MF CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o.d -o CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp [ 36%] Generating MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQCreatorDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeViewItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating MIRIAMUI/moc_CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp_parameters [ 37%] Generating MIRIAMUI/ui_CQMiriamWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQMiriamWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.ui [ 37%] Generating MIRIAMUI/ui_CQRDFTreeView.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQRDFTreeView.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.ui [ 37%] Generating UI/moc_AboutDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp_parameters [ 37%] Generating UI/moc_CColorScale.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating UI/moc_CCopasiPlot2YSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiPlotSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CProgressBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp_parameters [ 38%] Generating UI/moc_CQAnalyticsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidgetDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp_parameters [ 38%] Generating UI/moc_CQBaseDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBaseTreeDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPane.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPaneDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp_parameters [ 38%] Generating UI/moc_CQCheckModelWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp_parameters [ 38%] Generating UI/moc_CQComboDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp_parameters [ 38%] Generating UI/moc_CQCompartment.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentCopyOptions.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp_parameters [ 39%] Generating UI/moc_CQCopasiApplication.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp_parameters [ 39%] Generating UI/moc_CQCrossSectionTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp_parameters [ 39%] Generating UI/moc_CQDateTimeEditDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp_parameters [ 39%] Generating UI/moc_CQDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp_parameters [ 39%] Generating UI/moc_CQDependencyDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp_parameters [ 39%] Generating UI/moc_CQDependencyWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp_parameters [ 39%] Generating UI/moc_CQDifferentialEquations.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp_parameters [ 39%] Generating UI/moc_CQEFMListWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMNetReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMSpeciesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp_parameters [ 39%] Generating UI/moc_CQEventDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp_parameters [ 40%] Generating UI/moc_CQEventWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp_parameters [ 40%] Generating UI/moc_CQEventsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpandModelData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentSelection.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQExpressionMmlStackedWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQExpressionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 40%] Generating UI/moc_CQFittingItemWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFittingResultTab1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 40%] Generating UI/moc_CQFittingWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFluxModeDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFunctionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp_parameters [ 41%] Generating UI/moc_CQFunctionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 41%] Generating UI/moc_CQGlobalQuantitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantityDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp_parameters [ 41%] Generating UI/moc_CQLNAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:25: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 525 | size_t imax = TaskList.size(); /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:337: Warning 383: operator++ ignored /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘int runScheduledTasks(CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:10: warning: unused variable ‘imax’ [-Wunused-variable] 525 | size_t imax = TaskList.size(); | ^~~~ [ 41%] Generating UI/moc_CQLayoutsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 41%] Generating UI/moc_CQLyapWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ [ 41%] Generating UI/moc_CQMCAWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp_parameters [ 41%] Generating UI/moc_CQMathMatrixWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp_parameters [ 41%] Generating UI/moc_CQMatrixDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp_parameters [ 41%] Generating UI/moc_CQMergingData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp_parameters [ 41%] Generating UI/moc_CQMessageBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp_parameters [ 41%] Generating UI/moc_CQMmlScrollView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp_parameters [ 42%] Generating UI/moc_CQModelValue.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp_parameters [ 42%] Generating UI/moc_CQModelWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 42%] Generating UI/moc_CQMultipleSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 42%] Generating UI/moc_CQNameSelectionDialog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQNotes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp_parameters [ 42%] Generating UI/moc_CQOptPopulation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp_parameters In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQOptimizationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQOptimizationWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp_parameters [ 42%] Generating UI/moc_CQOscillationTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 42%] Generating UI/moc_CQParameterEstimationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp_parameters [ 42%] Generating UI/moc_CQParameterGroupDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 43%] Generating UI/moc_CQParameterGroupView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 43%] Generating UI/moc_CQParameterOverviewDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp_parameters ../swig/CDataVector.i:310: Warning 404: Duplicate template instantiation of 'vector< CRegisteredCommonName >' with name 'ReportItemVector' ignored, ../swig/CCommonName.i:46: Warning 404: previous instantiation of 'vector< CRegisteredCommonName >' with name 'ReportItemVector'. [ 43%] Generating UI/moc_CQParameterResultItemModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.h:0: Note: No relevant classes found. No output generated. In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 43%] Generating UI/moc_CQParameterSetsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterSetsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPlotDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp_parameters [ 43%] Generating UI/moc_CQPlotsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPreferenceDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemText.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp_parameters [ 44%] Generating UI/moc_CQPushButtonDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp_parameters [ 44%] Generating UI/moc_CQReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp_parameters [ 44%] Generating UI/moc_CQReactionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp_parameters [ 44%] Generating UI/moc_CQReportDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinition.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinitionSelect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp_parameters [ 44%] Generating UI/moc_CQReportListItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQReportsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp_parameters [ 44%] Generating UI/moc_CQSBMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLImportDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp_parameters [ 44%] Generating UI/moc_CQScanWidgetParameterSet.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 44%] Generating UI/moc_CQScrolledDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp_parameters [ 44%] Generating UI/moc_CQSensResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQSimpleSelectionTree.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp_parameters [ 45%] Generating UI/moc_CQSortFilterProxyModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.h:0: Note: No relevant classes found. No output generated. [ 45%] Generating UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp_parameters [ 45%] Generating UI/moc_CQSpinBoxDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp_parameters [ 45%] Generating UI/moc_CQSplashWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp_parameters [ 45%] Generating UI/moc_CQStartValueReset.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp_parameters [ 45%] Generating UI/moc_CQSteadyStateResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultSubWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSATimeScaleWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp_parameters [ 46%] Generating UI/moc_CQTabWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp_parameters [ 46%] Generating UI/moc_CQTableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp_parameters [ 46%] Generating UI/moc_CQTableWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.h:0: Note: No relevant classes found. No output generated. [ 46%] Generating UI/moc_CQTaskBtnWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp_parameters ../swig/COptProblem.i:39: Warning 404: Duplicate template instantiation of 'CVector< double >' with name 'FloatCVector' ignored, ../swig/CVector.i:122: Warning 404: previous instantiation of 'CVector< double >' with name 'FloatVector'. [ 46%] Generating UI/moc_CQTaskHeaderWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskMethodWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp_parameters [ 46%] Generating UI/moc_CQTextDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp_parameters [ 46%] Generating UI/moc_CQThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘exportSBML()’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:827:27: warning: ‘SBMLSchema’ may be used uninitialized [-Wmaybe-uninitialized] 827 | copasi::SBMLSchema_enum SBMLSchema; | ^~~~~~~~~~ [ 46%] Generating UI/moc_CQTimeSensWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp_parameters [ 46%] Generating UI/moc_CQTrajectoryWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp_parameters [ 46%] Generating UI/moc_CQUndoTester.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp_parameters [ 47%] Generating UI/moc_CQUnitDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp_parameters [ 47%] Generating UI/moc_CQUnitDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp_parameters [ 47%] Generating UI/moc_CQUnitsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp_parameters [ 47%] Generating UI/moc_CQUpdateAvogadro.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp_parameters [ 47%] Generating UI/moc_CQUpdatesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp_parameters [ 47%] Generating UI/moc_CQValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CQValidatorUnit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp_parameters [ 47%] Generating UI/moc_CScanContainerWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp_parameters [ 47%] Generating UI/moc_CScanItemData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CScanWidgetRandom.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetRepeat.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetScan.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetTask.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp_parameters [ 48%] Generating UI/moc_CUpDownSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp_parameters [ 48%] Generating UI/moc_CWindowInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp_parameters [ 48%] Generating UI/moc_ChemEqValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiGuiTypes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiSlider.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp_parameters [ 48%] Generating UI/moc_DataModelGUI.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp_parameters [ 48%] Generating UI/moc_DefaultplotDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp_parameters [ 48%] Generating UI/moc_FunctionWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp_parameters [ 48%] Generating UI/moc_MyLineEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_ObjectBrowserWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp_parameters [ 49%] Generating UI/moc_ReactionsWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp_parameters [ 49%] Generating UI/moc_ScanWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp_parameters [ 49%] Generating UI/moc_SensWidgetComboBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp_parameters [ 49%] Generating UI/moc_SensitivitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp_parameters [ 49%] Generating UI/moc_SliderDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp_parameters [ 49%] Generating UI/moc_SliderSettingsDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp_parameters [ 49%] Generating UI/moc_StateSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp_parameters [ 49%] Generating UI/moc_SteadyStateWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp_parameters [ 49%] Generating UI/moc_TaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp_parameters [ 49%] Generating UI/moc_copasiWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp_parameters [ 49%] Generating UI/moc_copasiui3window.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp_parameters [ 49%] Generating UI/moc_listviews.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp_parameters [ 49%] Generating UI/moc_objectdebug.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp_parameters [ 49%] Generating UI/moc_parametertable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp_parameters [ 50%] Generating UI/moc_qtUtilities.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:322: Warning 401: Base class 'CVectorCore< CFunction const * >' undefined. ../swig/CVector.i:137: Warning 401: 'CVectorCore< CFunction const * >' must be defined before it is used as a base class. /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:322: Warning 401: Base class 'CVectorCore< CObjectInterface const * >' undefined. ../swig/CVector.i:139: Warning 401: 'CVectorCore< CObjectInterface const * >' must be defined before it is used as a base class. /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:0: Note: No relevant classes found. No output generated. [ 50%] Generating UI/ui_CEntityProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CEntityProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CEntityProvenanceDialog.ui [ 50%] Generating UI/ui_CLNAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.ui [ 50%] Generating UI/ui_CMCAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.ui [ 50%] Generating UI/ui_CProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProvenanceDialog.ui [ 50%] Generating UI/ui_CQAnalyticsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQAnalyticsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.ui [ 50%] Generating UI/ui_CQArrayAnnotationsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQArrayAnnotationsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.ui [ 50%] Generating UI/ui_CQBrowserPane.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQBrowserPane.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.ui [ 50%] Generating UI/ui_CQCheckModelWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCheckModelWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.ui [ 50%] Generating UI/ui_CQCompartment.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.ui [ 50%] Generating UI/ui_CQCompartmentCopyOptions.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentCopyOptions.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.ui [ 50%] Linking CXX executable CopasiSE cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSE.dir/link.txt --verbose=1 [ 51%] Generating UI/ui_CQCompartmentsWidget.h /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -o CopasiSE ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.ui /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:59: Warning 401: Nothing known about base class 'SBMLUnitSupport'. Ignored. [ 51%] Generating UI/ui_CQCrossSectionTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCrossSectionTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.ui [ 51%] Generating UI/ui_CQDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.ui [ 51%] Generating UI/ui_CQDependencyDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.ui [ 51%] Generating UI/ui_CQDependencyWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.ui [ 51%] Generating UI/ui_CQDifferentialEquations.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDifferentialEquations.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.ui [ 51%] Generating UI/ui_CQEFMListWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMListWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.ui [ 51%] Generating UI/ui_CQEFMResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.ui [ 51%] Generating UI/ui_CQEFMWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.ui [ 51%] Generating UI/ui_CQEventWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.ui [ 51%] Generating UI/ui_CQEventsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.ui [ 51%] Generating UI/ui_CQExpandModelData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpandModelData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.ui [ 51%] Generating UI/ui_CQExperimentData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.ui [ 51%] Generating UI/ui_CQExperimentSelection.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentSelection.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.ui [ 52%] Generating UI/ui_CQExpressionMmlStackedWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.ui [ 52%] Generating UI/ui_CQFittingItemWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingItemWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.ui [ 52%] Generating UI/ui_CQFittingResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.ui [ 52%] Generating UI/ui_CQFittingResultTab1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResultTab1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.ui [ 52%] Generating UI/ui_CQFittingWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.ui [ 52%] Generating UI/ui_CQFunctionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFunctionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.ui [ 52%] Generating UI/ui_CQGlobalQuantitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQGlobalQuantitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.ui [ 52%] Generating UI/ui_CQLNAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLNAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.ui [ 52%] Generating UI/ui_CQLayoutsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLayoutsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.ui [ 52%] Generating UI/ui_CQLyapResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.ui [ 52%] Generating UI/ui_CQLyapWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.ui [ 52%] Generating UI/ui_CQMCAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMCAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.ui [ 52%] Generating UI/ui_CQMathMatrixWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.ui [ 53%] Generating UI/ui_CQMatrixDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMatrixDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.ui [ 53%] Generating UI/ui_CQMergingData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMergingData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.ui [ 53%] Generating UI/ui_CQMessageBox.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMessageBox.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.ui [ 53%] Generating UI/ui_CQModelValue.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.ui [ 53%] Generating UI/ui_CQModelWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.ui [ 53%] Generating UI/ui_CQMoietiesTaskResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.ui [ 53%] Generating UI/ui_CQMoietiesTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.ui [ 53%] Generating UI/ui_CQMultipleSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMultipleSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.ui [ 53%] Generating UI/ui_CQNameSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNameSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.ui [ 53%] Generating UI/ui_CQNotes.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNotes.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.ui [ 53%] Generating UI/ui_CQOptimizationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.ui [ 53%] Generating UI/ui_CQOptimizationWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.ui [ 53%] Generating UI/ui_CQOscillationTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOscillationTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.ui [ 54%] Generating UI/ui_CQParameterEstimationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterEstimationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.ui [ 54%] Generating UI/ui_CQParameterOverviewWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterOverviewWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.ui [ 54%] Generating UI/ui_CQParameterSetWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetWidget.ui [ 54%] Generating UI/ui_CQParameterSetsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.ui [ 54%] Generating UI/ui_CQParametersWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParametersWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParametersWidget.ui [ 54%] Generating UI/ui_CQPlotsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPlotsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.ui [ 54%] Generating UI/ui_CQPreferenceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPreferenceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.ui [ 54%] Generating UI/ui_CQProgressDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.ui [ 54%] Generating UI/ui_CQProgressItem.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItem.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.ui [ 54%] Generating UI/ui_CQProgressItemBar.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemBar.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.ui [ 54%] Generating UI/ui_CQProgressItemText.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemText.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.ui [ 54%] Generating UI/ui_CQReactionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReactionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.ui [ 54%] Generating UI/ui_CQReportDefinition.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinition.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.ui [ 54%] Generating UI/ui_CQReportDefinitionSelect.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinitionSelect.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.ui [ 55%] Generating UI/ui_CQReportsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.ui [ 55%] Generating UI/ui_CQSEDMLImportDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.ui [ 55%] Linking CXX executable CopasiSBW cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSBW.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -rdynamic CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -o CopasiSBW ../libCOPASISE.a //usr/lib64/libSBW.so -lpthread -lz /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas -lz [ 55%] Generating UI/ui_CQScanWidgetParameterSet.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScanWidgetParameterSet.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.ui [ 55%] Generating UI/ui_CQScrolledDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScrolledDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.ui [ 55%] Generating UI/ui_CQSensResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.ui [ 55%] Generating UI/ui_CQSpeciesDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.ui [ 55%] Generating UI/ui_CQSpeciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.ui [ 55%] Generating UI/ui_CQSplashWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSplashWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.ui [ 55%] Generating UI/ui_CQStartValueReset.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQStartValueReset.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.ui [ 55%] Generating UI/ui_CQSteadyStateResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.ui [ 55%] Generating UI/ui_CQTSSAResultSubWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.ui [ 55%] Generating UI/ui_CQTSSAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.ui [ 55%] Generating UI/ui_CQTabWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTabWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.ui [ 56%] Generating UI/ui_CQTaskBtnWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskBtnWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.ui [ 56%] Generating UI/ui_CQTaskHeaderWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskHeaderWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.ui [ 56%] Generating UI/ui_CQTaskMethodWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskMethodWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.ui [ 56%] Generating UI/ui_CQTextDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTextDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.ui [ 56%] Generating UI/ui_CQTimeSensWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSensWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.ui [ 56%] Generating UI/ui_CQTimeSeriesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSeriesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.ui [ 56%] Generating UI/ui_CQTrajectoryWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTrajectoryWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.ui [ 56%] Generating UI/ui_CQUndoHistoryDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUndoHistoryDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoHistoryDialog.ui [ 56%] Generating UI/ui_CQUnitDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.ui [ 56%] Generating UI/ui_CQUnitsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.ui [ 56%] Generating UI/ui_CQUpdateAvogadro.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUpdateAvogadro.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.ui [ 56%] Generating UI/ui_CScanWidgetRandom.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRandom.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.ui [ 56%] Generating UI/ui_CScanWidgetRepeat.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRepeat.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.ui [ 56%] Generating UI/ui_CScanWidgetScan.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetScan.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.ui [ 57%] Generating UI/ui_CScanWidgetTask.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetTask.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.ui [ 57%] Generating UI/ui_CUpDownSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CUpDownSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.ui [ 57%] Generating UI/ui_DefaultplotDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_DefaultplotDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.ui [ 57%] Generating UI/ui_FunctionWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.ui [ 57%] Generating UI/ui_ReactionsWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.ui [ 57%] Generating UI/ui_SensitivitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SensitivitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.ui [ 57%] Generating UI/ui_SliderDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.ui [ 57%] Generating UI/ui_SliderSettingsDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderSettingsDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.ui [ 57%] Generating UI/ui_StateSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.ui [ 57%] Generating UI/ui_SteadyStateWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SteadyStateWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.ui [ 57%] Generating UI/ui_objectdebug.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_objectdebug.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.ui [ 57%] Generating barChart/moc_CQ3DBarsModifier.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/barChart && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp_parameters [ 57%] Generating layoutUI/moc_BezierCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CArrow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CCompartmentGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CDataEntity.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CLabel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CQAutolayoutWizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp_parameters [ 58%] Generating layoutUI/moc_CQCurrentValueTable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp_parameters [ 58%] Generating layoutUI/moc_CQLayoutThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp_parameters [ 58%] Generating layoutUI/moc_CQPlayerControlWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp_parameters [ 58%] Generating layoutUI/moc_CQSpringLayoutParameterWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp_parameters [ 58%] Generating layoutUI/moc_CSimSummaryInfo.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CVisParameters.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_BandedGraphWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp_parameters [ 58%] Generating plotUI/moc_C2DCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_C2DPlotCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CBandedGraphData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: Overloaded method CDataValue::CDataValue(int const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: as it is shadowed by CDataValue::CDataValue(CDataValue::Type const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: Overloaded method CDataValue::CDataValue(CDataValue::Type const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: as it is shadowed by CDataValue::CDataValue(int const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &). /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CHistoCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CLinearColorMap.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_COutputHandlerPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotSpectogram.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CQAdvancedPlotSettings.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp_parameters [ 58%] Generating plotUI/moc_CQCustomPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp_parameters [ 58%] Generating plotUI/moc_CQDataVizPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp_parameters [ 59%] Generating plotUI/moc_CQExtender.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp_parameters [ 59%] Generating plotUI/moc_CQMarchingSquares.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotColors.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotEditWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp_parameters [ 59%] Generating plotUI/moc_CQSpectogramWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp_parameters [ 59%] Generating plotUI/moc_CQtChartsPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQwtPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp_parameters [ 59%] Generating plotUI/moc_CSpectorgramData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_HistoWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp_parameters [ 59%] Generating plotUI/moc_curve2dwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp_parameters [ 59%] Generating plotUI/moc_plotwindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp_parameters [ 59%] Generating plotUI/moc_scrollbar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp_parameters [ 59%] Generating plotUI/moc_scrollzoomer.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp_parameters [ 59%] Generating plotUI/ui_BandedGraphWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_BandedGraphWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.ui [ 59%] Generating plotUI/ui_CQAdvancedPlotSettings.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQAdvancedPlotSettings.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.ui [ 59%] Generating plotUI/ui_CQPlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQPlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.ui [ 59%] Generating plotUI/ui_CQSpectogramWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQSpectogramWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.ui [ 60%] Generating plotUI/ui_HistoWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_HistoWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.ui [ 60%] Generating plotUI/ui_PlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_PlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/PlotSubwidget.ui [ 60%] Generating plotUI/ui_curve2dwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_curve2dwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.ui [ 60%] Generating qlayout/moc_CQAnimationControls.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationSettingsEditor.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject * >::operator ()(size_t const &). [ 60%] Generating qlayout/moc_CQConnectionGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:0: Note: No relevant classes found. No output generated. /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject const * >::operator ()(size_t const &). [ 60%] Generating qlayout/moc_CQCopasiEffect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescription.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescriptionEdit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CFunction const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CFunction const * >::operator ()(size_t const &). cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp_parameters [ 60%] Generating qlayout/moc_CQElementProperties.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp_parameters [ 61%] Generating qlayout/moc_CQLabelGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CObjectInterface const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CObjectInterface const * >::operator ()(size_t const &). [ 61%] Generating qlayout/moc_CQLayoutScene.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp_parameters [ 61%] Generating qlayout/moc_CQRenderConverter.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQRoundedRect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.h:0: Note: No relevant classes found. No output generated. ../swig/CCopasiMessage.i:55: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:259: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t,...). ../swig/CCopasiMessage.i:43: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...). /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...) effectively ignored, ../swig/CCopasiMessage.i:43: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *). [ 61%] Generating qlayout/moc_CQStyledGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQZoomableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp_parameters [ 61%] Generating qlayout/ui_CQAnimationControls.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationControls.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.ui [ 62%] Generating qlayout/ui_CQAnimationSettingsEditor.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationSettingsEditor.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.ui [ 62%] Generating qlayout/ui_CQAnimationWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.ui [ 62%] Generating qlayout/ui_CQEffectDescriptionEdit.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQEffectDescriptionEdit.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.ui [ 62%] Generating qlayout/ui_CQElementProperties.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQElementProperties.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.ui [ 62%] Generating qrc_copasi.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/rcc --name copasi --output /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/copasi.qrc [ 62%] Generating resourcesUI/moc_CQIconResource.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CMathMLToTeX.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CStructureParser.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating undoUI/moc_CQUndoDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp_parameters [ 63%] Generating undoUI/moc_CQUndoDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDialog.cpp_parameters [ 63%] Generating undoUI/ui_CQUndoDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/ui_CQUndoDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.ui [ 63%] Generating wizard/moc_wizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/wizard && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp_parameters cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASIUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQCreatorDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../common/patch-wrapper.cmake -- Patching C++ wrapper cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DVERSION=4.42.284 -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/patch-python.cmake -- Patching Python wrapper cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -Dbinding_python_lib_EXPORTS -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/usr/include/python3.13 -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -MF CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o.d -o CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4594: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:46, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘CDataObject* CVector_Sl_CDataObject_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6944:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6944 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CDataObject* CVector_Sl_CDataObject_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6958:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6958 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CFunction* CVector_Sl_CFunction_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6966:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6966 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CObjectInterface* CVector_Sl_CObjectInterface_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6980:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6980 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘std::vector CDataHandler_getNthRow(CDataHandler*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14276:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14276 | if (index >= data.size()) | ~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15447: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15550: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SBMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:203422:3: warning: deleting object of polymorphic class type ‘SBMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 203422 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_CSBMLExporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:204301:3: warning: deleting object of polymorphic class type ‘CSBMLExporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 204301 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SEDMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:205187:3: warning: deleting object of polymorphic class type ‘SEDMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 205187 | delete arg1; | ^~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQReferenceDM.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/CQ3DBarsModifier.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp: In member function ‘void CQSelectionWizardPage::fillTree(const CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:46: warning: enum constant in boolean context [-Wint-in-bool-context] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:66: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:54: warning: enum constant in boolean context [-Wint-in-bool-context] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:74: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:95:16: note: by ‘virtual void CLMetabGlyph::exportToSBML(SpeciesGlyph*, const std::map&, std::map, const SBase*>&) const’ 95 | virtual void exportToSBML(SpeciesGlyph * g, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:168:16: note: by ‘virtual void CLCompartmentGlyph::exportToSBML(CompartmentGlyph*, const std::map&, std::map, const SBase*>&) const’ 168 | virtual void exportToSBML(CompartmentGlyph * cg, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:258:16: note: by ‘virtual void CLTextGlyph::exportToSBML(TextGlyph*, const std::map&, std::map, const SBase*>&) const’ 258 | virtual void exportToSBML(TextGlyph * g, | ^~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQPlayerControlWidget.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:128:88: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 128 | const CEFMTask *task = dynamic_cast< const CEFMTask * >(&mpDataModel->getTaskList()->operator[]("Elementary Flux Modes")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp: In member function ‘virtual void QCustomTimeCourseAnimation::getScales(std::vector&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:348:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 348 | if (index == C_INVALID_INDEX) [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiEffect.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:189342:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:5052:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5052 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13994:14: note: ‘success’ was declared here 13994 | bool success; | ^~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:189303:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:5052:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5052 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13974:14: note: ‘success’ was declared here 13974 | bool success; | ^~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQZoomableView.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_processRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:189404:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:5052:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5052 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_processRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14038:14: note: ‘success’ was declared here 14038 | bool success; | ^~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual bool CQCustomPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:549:8: warning: variable ‘needLeft’ set but not used [-Wunused-but-set-variable] 549 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual void CQCustomPlot::wheelEvent(QWheelEvent*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1535:50: warning: ‘QPoint QWheelEvent::pos() const’ is deprecated: Use position() [-Wdeprecated-declarations] 1535 | QCPLayerable * element = layerableAt(event->pos(), true); | ~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QPaintEvent:1, from /usr/include/qcustomplot.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:24: /usr/include/qt5/QtGui/qevent.h:225:19: note: declared here 225 | inline QPoint pos() const { return p.toPoint(); } | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1632:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 1632 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1755:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1755 | if (current_count != data_size && pY2) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1759:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1759 | for (int i = current_count; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1784:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1784 | if (current_count != data_size && helper) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1802:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1802 | if (data_size != current_count) | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1815:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1815 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1853:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1853 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1894:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1894 | for (int l = 0; l < contours.size(); l++) | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1897:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1897 | for (int j = 0; j < contours[l].size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::resizeCurveData(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1978:48: warning: unused variable ‘data’ [-Wunused-variable] 1978 | std::vector< CVector< double > * > & data = mData[activity]; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::initializeIndependentData(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2179:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2179 | for (int c = 0; c < numCols; ++c) | ~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2170:14: warning: unused variable ‘independentObjects’ [-Wunused-variable] 2170 | auto & independentObjects = pExperiment->getIndependentObjects(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateSteadyStateInfo(int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2203:9: warning: unused variable ‘model’ [-Wunused-variable] 2203 | auto& model = *CRootContainer::getDatamodelList()->begin(); | ^~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:47:1: warning: when initialized here [-Wreorder] 47 | CQDataVizPlot::CQDataVizPlot(QWidget * parent) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(const CPlotSpecification*, QWidget*, PlotMode)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:72:1: warning: when initialized here [-Wreorder] 72 | CQDataVizPlot::CQDataVizPlot(const CPlotSpecification * plotspec, QWidget * parent, PlotMode mode) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:267:8: warning: unused variable ‘needLeft’ [-Wunused-variable] 267 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:268:8: warning: unused variable ‘needRight’ [-Wunused-variable] 268 | bool needRight = false; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:372:12: warning: unused variable ‘isSpectogram’ [-Wunused-variable] 372 | bool isSpectogram = pItem->getType() == CPlotItem::spectogram; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In function ‘std::set resizeRange(std::set&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:581:20: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 581 | if (range.size() < maxRange) | ~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘void CQDataVizPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:634:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 634 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:656:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 656 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:704:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 704 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:710:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 710 | for (auto i = 0; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:641:12: warning: unused variable ‘curve_type’ [-Wunused-variable] 641 | auto curve_type = (*itCurves)->property("curve_type").toInt(); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: unused variable ‘data_changed’ [-Wunused-variable] 628 | bool data_changed = false; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::saveData(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1024:26: warning: unused variable ‘scatter’ [-Wunused-variable] 1024 | QScatter3DSeries * scatter = qobject_cast< QScatter3DSeries * >(curve.second); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1019:8: warning: unused variable ‘FirstHistogram’ [-Wunused-variable] 1019 | bool FirstHistogram = true; | ^~~~~~~~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQExtender.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:76:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 76 | switch (cellSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘void CQMarchingSquares::isoSubpath(IsoCell*, int, int, levelPaths&, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:547:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 547 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:584:14: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 584 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:90:1: warning: control reaches end of non-void function [-Wreturn-type] 90 | } | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp: In member function ‘void CQPlotSubwidget::addSpectrum()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:592:14: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 592 | size_t imax; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp: In member function ‘virtual double CSpectorgramData::value(double, double) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:342:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 342 | if (xpos == mSizeX) --xpos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:344:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 344 | if (ypos == mSizeY) --ypos; | ~~~~~^~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp: In member function ‘HistoWidget::buttonPressedX()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:90:66: warning: ‘nonnull’ argument ‘this’ compared to NULL [-Wnonnull-compare] 90 | while (!(pParent = dynamic_cast< CQPlotSubwidget * >(tmp)) && this) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 68%] Built target CopasiSE [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollbar.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollzoomer.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:183:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 183 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:187:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 187 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mtableNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:210:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 210 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:214:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 214 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:69:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 69 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:337:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 337 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/AboutDialog.cpp [ 68%] Built target CopasiSBW [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:57:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 57 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:227:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 227 | dynamic_cast(& mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:298:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 298 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:69:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/analytics/CAnalyticsTask.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidgetDM.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseTreeDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:16: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQComboDelegate.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:457:91: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 457 | updateNode(findNodeFromId(ListViews::WidgetType::SteadyState), mpCopasiDM->getTaskList()->operator[]("Steady-State").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp: In member function ‘void CQBrowserPaneDM::createStaticDM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 993 | switch (pNodeInfo->node) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Compartments’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Species’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Reactions’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Events’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSets’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Plots’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplates’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp: In constructor ‘CQCheckModelWindow::CQCheckModelWindow(CopasiUI3Window*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:21: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp: In member function ‘virtual void CQCompartmentsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCopasiApplication.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDateTimeEditDelegate.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp: In member function ‘virtual void CQEventsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:250:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 250 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘void CQExperimentData::slotFileEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:628:10: warning: unused variable ‘i’ [-Wunused-variable] 628 | size_t i = mpExperimentSetCopy->getExperimentCount() - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘bool CQExperimentData::saveTable(CExperiment*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:1537:8: warning: variable ‘FoundTime’ set but not used [-Wunused-but-set-variable] 1537 | bool FoundTime = false; | ^~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h: In constructor ‘CQExpressionWidget::CQExpressionWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:273:15: warning: ‘CQExpressionWidget::mCursor’ will be initialized after [-Wreorder] 273 | QTextCursor mCursor; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:272:28: warning: ‘CQExpressionHighlighter* CQExpressionWidget::mpExpressionHighlighter’ [-Wreorder] 272 | CQExpressionHighlighter *mpExpressionHighlighter; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:218:1: warning: when initialized here [-Wreorder] 218 | CQExpressionWidget::CQExpressionWidget(QWidget * parent, const char * name) | ^~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadExperimentSetIntoTree(const CExperimentSet&, QTreeWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: variable ‘pItem’ set but not used [-Wunused-but-set-variable] 144 | QTreeWidgetItem* pItem = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:208:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: 208 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘virtual bool CQFittingResult::enterProtected()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:275:32: warning: unused variable ‘Solutions’ [-Wunused-variable] 275 | const CVector< C_FLOAT64 > & Solutions = mpProblem->getSolutionVariables(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:276:32: warning: unused variable ‘StdDeviations’ [-Wunused-variable] 276 | const CVector< C_FLOAT64 > & StdDeviations = mpProblem->getVariableStdDeviations(); | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:277:32: warning: unused variable ‘Gradients’ [-Wunused-variable] 277 | const CVector< C_FLOAT64 > & Gradients = mpProblem->getVariableGradients(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:525:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 525 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:530:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 530 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/x86_64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/qt5/QtCore/qbytearray.h:52, from /usr/include/qt5/QtCore/qvariant.h:44, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:25: In member function ‘std::__new_allocator::construct(COptItem**, COptItem* const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, COptItem**, COptItem* const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:531:17, inlined from ‘std::vector >::push_back(COptItem* const&)’ at /usr/include/c++/14/bits/stl_vector.h:1285:30, inlined from ‘CQFittingItemWidget::slotNew()’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1137:25: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotNew()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1119:13: note: ‘pItem’ declared here 1119 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotParamEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:452:29: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 452 | pItem->setObjectCN(Selection[i]->getCN()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:434:21: note: ‘pItem’ declared here 434 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotCopy()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:952:15: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 952 | setTableText((int) row, pItem); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:925:13: note: ‘pItem’ declared here 925 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFluxModeDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp: In member function ‘virtual bool CQFittingWidget::taskFinishedEvent()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:309:8: warning: unused variable ‘result’ [-Wunused-variable] 309 | bool result = TaskWidget::taskFinishedEvent(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp: In member function ‘virtual void CQFunctionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:243:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 243 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp: In member function ‘virtual void CQGlobalQuantitiesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:251:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp [ 72%] Linking CXX shared library _COPASI.so cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -shared -Wl,-soname,_COPASI.so -o _COPASI.so CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o ../../libCOPASISE.a -lpython3.13 /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:60:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 60 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:77:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: 77 | mpTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Lyapunov Exponents")); /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:69:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp: In member function ‘virtual int CQMessageBox::exec()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:454:7: warning: unused variable ‘result’ [-Wunused-variable] 454 | int result = QDialog::exec(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h: In constructor ‘CQModelValue::CQModelValue(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:65:15: warning: ‘CQModelValue::mObjectCNToCopy’ will be initialized after [-Wreorder] 65 | CCommonName mObjectCNToCopy; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:57:17: warning: ‘CModelValue* CQModelValue::mpModelValue’ [-Wreorder] 57 | CModelValue * mpModelValue; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:50:1: warning: when initialized here [-Wreorder] 50 | CQModelValue::CQModelValue(QWidget* parent, const char* name) | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual QValidator::State CQValidatorXML::validate(QString&, int&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:85:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 85 | QXmlSimpleReader Validator; | ^~~~~~~~~ In file included from /usr/include/qt5/QtXml/QXmlInputSource:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:24: /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:86:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 86 | QXmlInputSource Input; | ^~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:153:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 153 | return QXmlDefaultHandler::startElement(namespaceURI, localName, qName, atts); | ^~~~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:163:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 163 | return QXmlDefaultHandler::endElement(namespaceURI, localName, qName); | ^~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:98:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 98 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Optimization")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp: In member function ‘void CQOptimizationResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:191:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 191 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:196:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 196 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQEllipseItem::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:90:12: warning: unused variable ‘m11’ [-Wunused-variable] 90 | double m11 = painter->transform().m11(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:472:34: warning: comparison of integer expressions of different signedness: ‘std::vector*>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 472 | if (mPopulation.size() > mMaxIterations) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In function ‘QString vec_to_string(CVector*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:541:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 541 | for (int i = 1; i < pVec->size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::update()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:720:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 720 | i == mMinIndex, | ~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:743:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 743 | i == mMinIndex, | ~~^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp: In member function ‘void CQParameterEstimationResult::applyToModelState()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:309:15: warning: unused variable ‘current’ [-Wunused-variable] 309 | int current = model->rowCount(); | ^~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp: In static member function ‘static QVariant CQParameterOverviewDM::diffData(const CModelParameter*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:373:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 373 | switch (pNode->getCompareResult()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:400:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 400 | switch (pNode->getCompareResult()) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp: In member function ‘virtual QVariant CQParameterSetsDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:91:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 91 | if (mpListOfParameterSets->size() <= index.row()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp: In member function ‘virtual void CQParameterSetsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:267:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp: In member function ‘virtual void CQPlotsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:275:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:314328:106: note: in a call to allocation function ‘operator new []’ declared here 314328 | return (void *)((CObjectInterface **) (CDataObject *)(CDataContainer *) ((CLGradientBase **) x)); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:314328:106: note: in a call to allocation function ‘operator new []’ declared here 314328 | return (void *)((CObjectInterface **) (CDataObject *)(CDataContainer *) ((CLGradientBase **) x)); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/qabstractitemmodel.h:43, from /usr/include/qt5/QtCore/qabstractproxymodel.h:43, from /usr/include/qt5/QtCore/qsortfilterproxymodel.h:43, from /usr/include/qt5/QtCore/QSortFilterProxyModel:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:13: In member function ‘QMapNode::lowerBound(QAbstractButton* const&)’, inlined from ‘QMapData::findNode(QAbstractButton* const&) const’ at /usr/include/qt5/QtCore/qmap.h:288:33, inlined from ‘QMap::operator[](QAbstractButton* const&)’ at /usr/include/qt5/QtCore/qmap.h:681:26, inlined from ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:98:25: /usr/include/qt5/QtCore/qmap.h:153:9: warning: ‘pEditor’ may be used uninitialized [-Wmaybe-uninitialized] 153 | if (!qMapLessThanKey(n->key, akey)) { | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp: In member function ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:58:21: note: ‘pEditor’ was declared here 58 | QAbstractButton * pEditor; | ^~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In constructor ‘CQReactionsWidget::CQReactionsWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:81:22: warning: unused variable ‘pWindow’ [-Wunused-variable] 81 | CopasiUI3Window *pWindow = dynamic_cast(parent->parent()); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In member function ‘virtual void CQReactionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:230:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp: In member function ‘virtual void CQReportsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:229:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp: In member function ‘virtual bool CQScanWidgetParameterSet::save(CCopasiParameterGroup*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:112:1: warning: control reaches end of non-void function [-Wreturn-type] 112 | } | ^ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:85:57: required from here 85 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Sensitivities")); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h: In constructor ‘CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:116:40: warning: ‘CQSimpleSelectionTree::mpOutputVector’ will be initialized after [-Wreorder] 116 | std::vector< const CDataObject * > * mpOutputVector; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:112:26: warning: ‘CExpressionGenerator* CQSimpleSelectionTree::mpExpressionGenerator’ [-Wreorder] 112 | CExpressionGenerator * mpExpressionGenerator; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget *parent) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:427:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: 427 | task = dynamic_cast(&pDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp: In member function ‘virtual void CQSpeciesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpinBoxDelegate.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:80:65: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 80 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:87:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 87 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSATimeScaleWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:82:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 82 | dynamic_cast(&pDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:224:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 224 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp: In member function ‘CQTSSAWidget::runTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:231:30: warning: ‘this’ pointer is null [-Wnonnull] 231 | mpTSSMethod->emptyVectors(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:157:8: note: in a call to non-static member function ‘CTSSAMethod::emptyVectors()’ 157 | void emptyVectors(); | ^~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableView.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:88: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:169, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:20: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp: In member function ‘void CQUndoTester::testModelDetail()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:163:11: warning: unused variable ‘pModel’ [-Wunused-variable] 163 | CModel* pModel = (*CRootContainer::getDatamodelList())[0].getModel(); | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp: In member function ‘virtual void CQUnitsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:245:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanContainerWidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CWindowInterface.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiSlider.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:71: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h: In constructor ‘DataModelGUI::DataModelGUI(QObject*, CDataModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:183:24: warning: ‘DataModelGUI::mpOutputHandlerPlot’ will be initialized after [-Wreorder] 183 | COutputHandlerPlot * mpOutputHandlerPlot; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:182:16: warning: ‘CDataModel* DataModelGUI::mpDataModel’ [-Wreorder] 182 | CDataModel * mpDataModel; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:96:1: warning: when initialized here [-Wreorder] 96 | DataModelGUI::DataModelGUI(QObject * parent, CDataModel * pDataModel): | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::notifyChanges(const CUndoData::CChangeSet&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:819:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 819 | switch (it->type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::addRecentFile(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘OMEX’ not handled in switch [-Wswitch] 952 | switch (mpDataModel->getContentType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/MyLineEdit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp: In member function ‘bool FunctionWidget1::loadParameterTable()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:152:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 152 | switch (params[i]->getUsage()) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp: In member function ‘void ReactionsWidget1::FillWidgetFromRI()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:406:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 406 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:16: /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:421:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 421 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensWidgetComboBox.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:861:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 861 | mpParentWindow->getMainWidget()->getTrajectoryWidget()->enter(pDataModel->getTaskList()->operator[]("Time-Course").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp: In member function ‘std::vector* SliderDialog::getCSlidersForObject(CDataObject*, std::vector*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:1087:8: warning: variable ‘issueWarning’ set but not used [-Wunused-but-set-variable] 1087 | bool issueWarning = false; | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h: In constructor ‘StateSubwidget::StateSubwidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:46:12: warning: ‘StateSubwidget::mpModel’ will be initialized after [-Wreorder] 46 | CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:45:28: warning: ‘const CSteadyStateTask* StateSubwidget::mpTask’ [-Wreorder] 45 | const CSteadyStateTask * mpTask; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:53:1: warning: when initialized here [-Wreorder] 53 | StateSubwidget::StateSubwidget(QWidget* parent, const char* name) | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:63: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:78: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:96: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:35: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h: In constructor ‘CopasiUI3Window::CopasiUI3Window()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:626:8: warning: ‘CopasiUI3Window::mSBWIgnoreShutdownEvent’ will be initialized after [-Wreorder] 626 | bool mSBWIgnoreShutdownEvent; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:459:11: warning: ‘QMenu* CopasiUI3Window::mpMenuSEDMLSupport’ [-Wreorder] 459 | QMenu * mpMenuSEDMLSupport; | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:242:1: warning: when initialized here [-Wreorder] 242 | CopasiUI3Window::CopasiUI3Window(): | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotUpdateMIRIAM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 2551 | bool success = true; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:3856:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: 3856 | for (auto & task : taskList) /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotCheckForUpdateFinished(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:4195:24: warning: unused variable ‘pReject’ [-Wunused-variable] 4195 | QPushButton *pReject = Question.addButton(QMessageBox::Cancel); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:114: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::createWidgetFromId(const WidgetType&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 504 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findTabWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 837 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Model’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] 908 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt 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/usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp: In member function ‘void ParameterTable::updateTable(CReactionInterface&, CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:202:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 202 | switch (ri.getUsage(i)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QVariant getParameterValue(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:82:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 82 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QList > getParameterValidValues(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:146:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 146 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘bool setParameterValue(CCopasiParameter*, const QVariant&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:220:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 220 | switch (pParameter->getType()) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘QVariant CQUndoDM::displayData(const QModelIndex&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:98:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | if (mpUndoStack->size() <= index.row() || | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:107:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 107 | return (index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:116:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | if ((index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:153:20: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 153 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:197:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 197 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:241:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 241 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:104:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 104 | switch (static_cast< ColumnType >(index.column())) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘virtual QVariant CQUndoDM::headerData(int, Qt::Orientation, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:296:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 296 | switch (static_cast< ColumnType >(section)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB 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/usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 86%] Built target binding_python_lib [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o /usr/bin/ranlib libCOPASIUI.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target libCOPASIUI /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/CMakeFiles/CopasiUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Building CXX object copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o -MF CMakeFiles/CopasiUI.dir/main.cpp.o.d -o CMakeFiles/CopasiUI.dir/main.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [100%] Linking CXX executable CopasiUI cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiUI.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiUI.dir/main.cpp.o -o CopasiUI ../libCOPASIUI.a /usr/lib64/libQt5Concurrent.so.5.15.12 /usr/lib64/libQt5Network.so.5.15.12 /usr/lib64/libQt5OpenGL.so.5.15.12 /usr/lib64/libQt5PrintSupport.so.5.15.12 /usr/lib64/libQt5Svg.so.5.15.12 /usr/lib64/libQt5Widgets.so.5.15.12 /usr/lib64/libQt5Xml.so.5.15.12 /usr/lib64/libQt5DataVisualization.so.5.15.12 /usr/lib64/libQt5Gui.so.5.15.12 /usr/lib64/libQt5Core.so.5.15.12 ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so /usr/lib64/libqwt-qt5.so /usr/lib64/libmml.so /usr/lib64/libqcustomplot-qt5.so /usr/lib64/libGL.so /usr/lib64/libGLU.so //usr/lib64/libSBW.so /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: warning: type ‘struct CQMmlScrollView’ violates the C++ One Definition Rule [-Wodr] 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a different type is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:51:16: note: the first difference of corresponding definitions is field ‘mpMmlWidget’ 51 | QtMmlWidget* mpMmlWidget; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a type with different number of fields is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_del ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_del ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_comp ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_comp ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target CopasiUI gmake[1]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.urS0Br + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 ++ dirname /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + DESTDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 + /usr/bin/cmake --install . -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/_COPASI.so -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi.pth -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/COPASI.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/add_optitems.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/checkModel.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/custom_output.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example1.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example2.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example3.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example4.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example5.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example6.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example7.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example8.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/example9.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/get_steady_state.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/print_model_parameterset.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/process_callback.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/remove_reaction.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/remove_unused_elements.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/restore_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/run_mca.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/setup_sensitivities.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/to_local_parameters.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples/write_ids_to_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/bin/CopasiSE -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/bin/CopasiUI -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/bin/CopasiSBW -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step1.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step2.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step3.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step4.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step5.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/TutWiz-Step6.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ModelSettingsDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/NewPlotAdded.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ObjectBrowserSelection.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ObjectBrowserTree.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/OutputAssistant.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/PlotCurveSelectionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/PlotDefinition.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/PlotWindow.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ReactionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ReactionOverview.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ReactionOverviewEmpty.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/ReportDefinitionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/doc/html/figures/TimeCourseDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/CircadianClock.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/DimericMWC-stiff.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/Genetic-2000Elo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/MAPK-HF96-layout.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/Metabolism-2000Poo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/NF-kappaB-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/NF-kappaB.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/NF-kappaB.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/Olsen2003_peroxidase.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/YeastGlycolysis.gps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/brusselator-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/brusselator.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/brusselator.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/oscli.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/examples/scan.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/icons/copasi/icons/Copasi.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/icons/copasi/icons/CopasiDoc.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/copasi/config/MIRIAMResources.xml + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13/site-packages/copasi/examples + install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/icons/copasi/icons + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/applications + cat + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/metainfo + install -pm 644 /builddir/build/SOURCES/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/metainfo/ + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 4.42.284-6.fc41 --unique-debug-suffix -4.42.284-6.fc41.x86_64 --unique-debug-src-base COPASI-4.42.284-6.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/COPASI-Build-284 find-debuginfo: starting Extracting debug info from 4 files DWARF-compressing 4 files sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/COPASI-4.42.284-6.fc41.x86_64 cpio: copasi/CChemEqParser.ypp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser.ypp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser.ypp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_yacc.cpp: Cannot stat: No such file or directory 61482 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/COPASI-4.42.284-6.fc41.x86_64/copasi/odepack++/CRadau5.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.EPjlQY + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + desktop-file-validate /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/applications/COPASI.desktop + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/metainfo/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/metainfo/COPASI.appdata.xml: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: COPASI-4.42.284-6.fc41.x86_64 Provides: COPASI = 4.42.284-6.fc41 COPASI(x86-64) = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: COPASI-sharp < 0:4.25.213-1 R-COPASI < 0:4.25.213-1 perl-COPASI < 0:4.25.213-1 Processing files: COPASI-gui-4.42.284-6.fc41.x86_64 Provides: COPASI-gui = 4.42.284-6.fc41 COPASI-gui(x86-64) = 4.42.284-6.fc41 application() application(COPASI.desktop) metainfo() metainfo(COPASI.appdata.xml) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5DataVisualization.so.5()(64bit) libQt5DataVisualization.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5PrintSupport.so.5()(64bit) libQt5PrintSupport.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libQt5Xml.so.5()(64bit) libQt5Xml.so.5(Qt_5)(64bit) libSBW.so.2.12()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmml.so.2()(64bit) libqcustomplot-qt5.so.2()(64bit) libqwt-qt5.so.6.2()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: COPASI-data-4.42.284-6.fc41.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.6yfPFS + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-data = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-COPASI-4.42.284-6.fc41.x86_64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.rd3HrN + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-COPASI = 4.42.284-6.fc41 python3-COPASI = 4.42.284-6.fc41 python3-COPASI(x86-64) = 4.42.284-6.fc41 python3.13-COPASI = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libpython3.13.so.1.0()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Obsoletes: python-COPASI < 4.42.284-6.fc41 python2-COPASI < 0:4.25.213-1 Processing files: COPASI-doc-4.42.284-6.fc41.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.chet1F + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-doc = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debugsource-4.42.284-6.fc41.x86_64 Provides: COPASI-debugsource = 4.42.284-6.fc41 COPASI-debugsource(x86-64) = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debuginfo-4.42.284-6.fc41.x86_64 Provides: COPASI-debuginfo = 4.42.284-6.fc41 COPASI-debuginfo(x86-64) = 4.42.284-6.fc41 debuginfo(build-id) = c12eff530408f8833b259822bb81e6b8fd139963 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-6.fc41 Processing files: COPASI-gui-debuginfo-4.42.284-6.fc41.x86_64 Provides: COPASI-gui-debuginfo = 4.42.284-6.fc41 COPASI-gui-debuginfo(x86-64) = 4.42.284-6.fc41 debuginfo(build-id) = 35234d0fc06c625becd864712ed2ab45fc542acf debuginfo(build-id) = 8ca5d94f3dbf042b6b0a914a321efc4c37eb3257 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-6.fc41 Processing files: python3-COPASI-debuginfo-4.42.284-6.fc41.x86_64 Provides: debuginfo(build-id) = ba604cc5fdbe24b9935aa99a9e02b08f57ba0831 python-COPASI-debuginfo = 4.42.284-6.fc41 python3-COPASI-debuginfo = 4.42.284-6.fc41 python3-COPASI-debuginfo(x86-64) = 4.42.284-6.fc41 python3.13-COPASI-debuginfo = 4.42.284-6.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(x86-64) = 4.42.284-6.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 Wrote: /builddir/build/RPMS/COPASI-debugsource-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/python3-COPASI-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-data-4.42.284-6.fc41.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-doc-4.42.284-6.fc41.noarch.rpm Wrote: /builddir/build/RPMS/python3-COPASI-debuginfo-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-debuginfo-4.42.284-6.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-debuginfo-4.42.284-6.fc41.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.LJjikm + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + /usr/bin/rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-6.fc41.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.wzpKm4 + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + rm -rf COPASI-Build-284 COPASI-Build-284.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild COPASI-4.42.284-6.fc41.src.rpm Finish: build phase for COPASI-4.42.284-6.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1710333877.360594/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-6.fc41.src.rpm) Config(child) 20 minutes 32 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "COPASI-gui", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI-doc", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "noarch" }, { "name": "python3-COPASI", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI-gui-debuginfo", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI-data", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "noarch" }, { "name": "COPASI-debugsource", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "python3-COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "x86_64" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "6.fc41", "arch": "src" } ] } RPMResults finished