Warning: Permanently added '3.239.102.35' (ED25519) to the list of known hosts. Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml/libsedml.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725273284.553665 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml/libsedml.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725273284.553665 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml/libsedml.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1725273284.553665/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (fallback) INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.0-1.fc39.noarch python3-dnf-plugins-core-4.8.0-1.fc39.noarch yum-4.21.0-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 35.1 KiB/s | 10.0 KiB | 00m00s Copr repository 100% | 96.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 159.6 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 54.5 MiB/s | 10.1 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 95.7 KiB coreutils x86_64 9.5-9.fc42 fedora 5.7 MiB cpio x86_64 2.15-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.1 MiB diffutils x86_64 3.10-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.6 MiB fedora-release-common noarch 42-0.3 fedora 19.4 KiB findutils x86_64 1:4.10.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.8 MiB gawk x86_64 5.3.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB glibc-minimal-langpack x86_64 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 0.0 B grep x86_64 3.11-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.0 MiB gzip x86_64 1.13-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 389.0 KiB info x86_64 7.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 361.8 KiB patch x86_64 2.7.6-25.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 266.7 KiB redhat-rpm-config noarch 294-1.fc42 fedora 186.4 KiB rpm-build x86_64 4.19.92-6.fc42 copr_base 194.2 KiB sed x86_64 4.9-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 861.5 KiB shadow-utils x86_64 2:4.15.1-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 4.1 MiB tar x86_64 2:1.35-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.9 MiB unzip x86_64 6.0-64.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 386.8 KiB util-linux x86_64 2.40.2-6.fc42 copr_base 3.8 MiB which x86_64 2.21-42.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 80.2 KiB xz x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-1.fc41 copr_base 2.2 MiB alternatives x86_64 1.30-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 copr_base 331.3 KiB authselect x86_64 1.5.0-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 153.5 KiB authselect-libs x86_64 1.5.0-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 818.3 KiB basesystem noarch 11-21.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 0.0 B binutils x86_64 2.43.1-1.fc42 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 copr_base 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 80.7 KiB ca-certificates noarch 2024.2.68_v8.0.302-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.3 MiB coreutils-common x86_64 9.5-9.fc42 fedora 11.2 MiB cracklib x86_64 2.9.11-6.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 238.9 KiB crypto-policies noarch 20240828-1.git5f66e81.fc42 fedora 136.9 KiB curl x86_64 8.9.1-3.fc42 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.3 MiB debugedit x86_64 5.0-17.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 199.3 KiB dwz x86_64 0.15-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 290.9 KiB ed x86_64 1.20.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 146.9 KiB efi-srpm-macros noarch 5-12.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 40.1 KiB elfutils x86_64 0.191-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.6 MiB 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KiB forge-srpm-macros noarch 0.3.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 39.0 KiB fpc-srpm-macros noarch 1.3-13.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 144.0 B gdb-minimal x86_64 15.1-1.fc42 copr_base 13.0 MiB gdbm x86_64 1:1.23-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 747.0 B glibc x86_64 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 6.7 MiB glibc-common x86_64 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.0 MiB glibc-gconv-extra x86_64 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 60.8 KiB jansson x86_64 2.13.1-10.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 88.3 KiB kernel-srpm-macros noarch 1.0-24.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 54.4 KiB krb5-libs x86_64 1.21.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.3 MiB libacl x86_64 2.3.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 40.0 KiB libarchive x86_64 3.7.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 922.6 KiB libattr x86_64 2.5.2-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 28.5 KiB libblkid x86_64 2.40.2-6.fc42 copr_base 262.5 KiB libbrotli x86_64 1.1.0-5.fc41 copr_base 837.6 KiB libcap x86_64 2.70-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 copr_base 69.2 KiB libcom_err x86_64 1.47.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 67.2 KiB libcurl x86_64 8.9.1-3.fc42 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 58.0 KiB libevent x86_64 2.1.12-14.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 895.7 KiB libfdisk x86_64 2.40.2-6.fc42 copr_base 362.9 KiB libffi x86_64 3.4.6-3.fc42 fedora 86.4 KiB libgcc x86_64 14.2.1-1.fc42 fedora 274.6 KiB libgomp x86_64 14.2.1-1.fc42 fedora 523.4 KiB libidn2 x86_64 2.3.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 329.1 KiB libmount x86_64 2.40.2-6.fc42 copr_base 355.8 KiB libnghttp2 x86_64 1.63.0-1.fc42 fedora 170.1 KiB libnsl2 x86_64 2.0.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 57.9 KiB libpkgconf x86_64 2.3.0-1.fc42 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 copr_base 417.8 KiB libselinux x86_64 3.7-5.fc41 copr_base 181.0 KiB libsemanage x86_64 3.7-2.fc41 copr_base 293.5 KiB libsepol x86_64 3.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 817.8 KiB libsmartcols x86_64 2.40.2-6.fc42 copr_base 180.4 KiB libssh x86_64 0.11.1-1.fc42 fedora 569.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ x86_64 14.2.1-1.fc42 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 175.7 KiB libtirpc x86_64 1.3.5-0.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 66.2 KiB libunistring x86_64 1.1-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB libutempter x86_64 1.2.1-15.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 57.7 KiB libuuid x86_64 2.40.2-6.fc42 copr_base 41.4 KiB libverto x86_64 0.3.2-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 29.5 KiB libxcrypt x86_64 4.4.36-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 266.8 KiB libxml2 x86_64 2.12.8-2.fc41 copr_base 1.7 MiB libzstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 285.0 KiB lua-srpm-macros noarch 1-14.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 145.5 KiB mpfr x86_64 4.2.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 112.0 B openldap x86_64 2.6.8-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 644.2 KiB openssl-libs x86_64 1:3.2.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.6 KiB pam x86_64 1.6.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.8 MiB pam-libs x86_64 1.6.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-56.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 861.0 B pkgconf x86_64 2.3.0-1.fc42 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc42 fedora 989.0 B popt x86_64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.14.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.14-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 456.0 B readline x86_64 8.2-10.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 493.2 KiB rpm x86_64 4.19.92-6.fc42 copr_base 3.1 MiB rpm-build-libs x86_64 4.19.92-6.fc42 copr_base 206.6 KiB rpm-libs x86_64 4.19.92-6.fc42 copr_base 721.8 KiB rpm-sequoia x86_64 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.4 MiB systemd-libs x86_64 256.5-1.fc42 fedora 2.0 MiB util-linux-core x86_64 2.40.2-6.fc42 copr_base 1.5 MiB xxhash-libs x86_64 0.8.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 88.5 KiB xz-libs x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 214.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.1.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 134.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. 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Importing PGP key 0x105EF944: Userid : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: Userid : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0x31645531: Userid : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. 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00m00s >>> Running post-install scriptlet: setup-0:2.15.0-5.fc41.noarch >>> Stop post-install scriptlet: setup-0:2.15.0-5.fc41.noarch [ 11/156] Installing filesystem-0:3.18- 100% | 3.4 MiB/s | 212.5 KiB | 00m00s [ 12/156] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 13/156] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 14/156] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 15/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 16/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [ 17/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 18/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [ 19/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [ 20/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [ 21/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [ 22/156] Installing kernel-srpm-macros 100% | 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| 99.0 MiB/s | 202.7 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 184.0 MiB/s | 3.9 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.2-6.fc42.x86_64 >>> Stop post-install scriptlet: util-linux-0:2.40.2-6.fc42.x86_64 [154/156] Installing authselect-0:1.5.0 100% | 77.1 MiB/s | 157.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [156/156] Installing info-0:7.1-3.fc41. 100% | 449.9 KiB/s | 362.2 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.f >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.x86_64 >>> Running post-transaction scriptlet: rpm-0:4.19.92-6.fc42.x86_64 >>> Stop post-transaction scriptlet: rpm-0:4.19.92-6.fc42.x86_64 >>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 Warning: skipped PGP checks for 128 package(s). Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-7.fc41.x86_64 authselect-libs-1.5.0-7.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-1.fc42.x86_64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.68_v8.0.302-3.fc41.noarch coreutils-9.5-9.fc42.x86_64 coreutils-common-9.5-9.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20240828-1.git5f66e81.fc42.noarch curl-8.9.1-3.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.0-17.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-7.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.x86_64 elfutils-debuginfod-client-0.191-8.fc41.x86_64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.x86_64 elfutils-libs-0.191-8.fc41.x86_64 fedora-gpg-keys-42-0.1.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.1.noarch fedora-repos-rawhide-42-0.1.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.1-1.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-3.fc41.x86_64 glibc-common-2.40-3.fc41.x86_64 glibc-gconv-extra-2.40-3.fc41.x86_64 glibc-minimal-langpack-2.40-3.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-2.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-3.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-6.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-3.fc41.x86_64 libcurl-8.9.1-3.fc42.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-6.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-1.fc42.x86_64 libgomp-14.2.1-1.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-6.fc42.x86_64 libnghttp2-1.63.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-5.fc41.x86_64 libsemanage-3.7-2.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-6.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-1.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.5-0.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libutempter-1.2.1-15.fc41.x86_64 libuuid-2.40.2-6.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-7.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-5.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-5.fc41.x86_64 pam-libs-1.6.1-5.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.14.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.14-3.fc41.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-294-1.fc42.noarch rpm-4.19.92-6.fc42.x86_64 rpm-build-4.19.92-6.fc42.x86_64 rpm-build-libs-4.19.92-6.fc42.x86_64 rpm-libs-4.19.92-6.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-9.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.5-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-6.fc42.x86_64 util-linux-core-2.40.2-6.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-3.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-2.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found setting SOURCE_DATE_EPOCH=1725235200 Wrote: /builddir/build/SRPMS/libsedml-2.0.32-13.fc42.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-x86_64-1725273284.553665/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1725273284.553665/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-63sfj3a1/libsedml/libsedml.spec) Config(child) 0 minutes 8 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/libsedml-2.0.32-13.fc42.src.rpm) Config(fedora-rawhide-x86_64) Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1725273284.553665/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management from host and used with --installroot: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.21.0-1.fc39.noarch python3-dnf-plugins-core-4.8.0-1.fc39.noarch yum-4.21.0-1.fc39.noarch dnf5-5.1.17-2.fc39.x86_64 dnf5-plugins-5.1.17-2.fc39.x86_64 Finish: chroot init Start: build phase for libsedml-2.0.32-13.fc42.src.rpm Start: build setup for libsedml-2.0.32-13.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found setting SOURCE_DATE_EPOCH=1725235200 Wrote: /builddir/build/SRPMS/libsedml-2.0.32-13.fc42.src.rpm Updating and loading repositories: fedora 100% | 29.3 KiB/s | 10.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 174.1 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 42.8 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 38.3 MiB/s | 10.1 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: bzip2-devel x86_64 1.0.8-19.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 309.8 KiB check-devel x86_64 0.15.2-16.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 120.0 KiB cmake x86_64 3.28.3-7.fc41 copr_base 31.6 MiB gcc x86_64 14.2.1-1.fc42 fedora 104.1 MiB gcc-c++ x86_64 14.2.1-1.fc42 fedora 38.2 MiB libnuml-devel x86_64 1.1.4-19.fc42 copr_base 307.6 KiB libsbml-devel x86_64 5.20.4-1.fc42 copr_base 36.6 MiB libxml2-devel x86_64 2.12.8-2.fc41 copr_base 3.4 MiB minizip-ng-compat-devel x86_64 4.0.7-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 86.5 KiB python3-devel x86_64 3.13.0~rc1-3.fc42 copr_base 1.8 MiB swig x86_64 4.2.1-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 6.0 MiB xerces-c-devel x86_64 3.2.5-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 4.1 MiB zlib-ng-compat-devel x86_64 2.1.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 106.8 KiB Installing dependencies: annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB annobin-plugin-gcc x86_64 12.70-1.fc42 fedora 985.6 KiB check x86_64 0.15.2-16.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 146.0 KiB check-static x86_64 0.15.2-16.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 115.6 KiB cmake-data noarch 3.28.3-7.fc41 copr_base 8.0 MiB cmake-filesystem x86_64 3.28.3-7.fc41 copr_base 0.0 B cmake-rpm-macros noarch 3.28.3-7.fc41 copr_base 7.5 KiB cpp x86_64 14.2.1-1.fc42 fedora 35.0 MiB emacs-filesystem noarch 1:30.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 0.0 B expat x86_64 2.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 284.8 KiB gcc-plugin-annobin x86_64 14.2.1-1.fc42 fedora 61.1 KiB glibc-devel x86_64 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 35.0 KiB glibc-headers-x86 noarch 2.40-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 2.2 MiB jsoncpp x86_64 1.9.5-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 253.4 KiB kernel-headers x86_64 6.11.0-0.rc5.43.fc42 fedora 6.4 MiB libb2 x86_64 0.98.1-12.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 42.2 KiB libmpc x86_64 1.3.1-6.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 164.7 KiB libnuml x86_64 1.1.4-19.fc42 copr_base 278.1 KiB libsbml x86_64 5.20.4-1.fc42 copr_base 9.7 MiB libstdc++-devel x86_64 14.2.1-1.fc42 fedora 15.4 MiB libuv x86_64 1:1.48.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 546.8 KiB libxcrypt-devel x86_64 4.4.36-7.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 30.3 KiB make x86_64 1:4.4.1-8.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.8 MiB minizip-ng-compat x86_64 4.0.7-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 158.6 KiB mpdecimal x86_64 2.5.1-16.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 204.9 KiB pyproject-rpm-macros noarch 1.14.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 105.7 KiB python-pip-wheel noarch 24.2-1.fc41 copr_base 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 22.1 KiB python3 x86_64 3.13.0~rc1-3.fc42 copr_base 31.8 KiB python3-libs x86_64 3.13.0~rc1-3.fc42 copr_base 40.3 MiB python3-packaging noarch 24.1-2.fc41 copr_base 422.3 KiB python3-rpm-generators noarch 14-11.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 6.4 KiB rhash x86_64 1.4.4-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 349.9 KiB subunit x86_64 1.4.4-4.fc41 copr_base 71.0 KiB subunit-devel x86_64 1.4.4-4.fc41 copr_base 5.3 KiB tzdata noarch 2024a-9.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 1.7 MiB vim-filesystem noarch 2:9.1.703-1.fc42 fedora 40.0 B xerces-c x86_64 3.2.5-5.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 3.6 MiB xz-devel x86_64 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_f41_build_latest_basearch 255.6 KiB Transaction Summary: Installing: 53 packages Total size of inbound packages is 103 MiB. Need to download 349 KiB. After this operation 357 MiB will be used (install 357 MiB, remove 0 B). [ 1/53] bzip2-devel-0:1.0.8-19.fc41.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/53] cmake-0:3.28.3-7.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/53] gcc-0:14.2.1-1.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/53] gcc-c++-0:14.2.1-1.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/53] libsbml-devel-0:5.20.4-1.fc42.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/53] libxml2-devel-0:2.12.8-2.fc41.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/53] minizip-ng-compat-devel-0:4.0.7 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/53] python3-devel-0:3.13.0~rc1-3.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/53] swig-0:4.2.1-8.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [10/53] xerces-c-devel-0:3.2.5-5.fc41.x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [11/53] zlib-ng-compat-devel-0:2.1.7-2. 100% | 0.0 B/s | 0.0 B | 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| 00m00s Running transaction [ 1/55] Verify package files 100% | 164.0 B/s | 53.0 B | 00m00s [ 2/55] Prepare transaction 100% | 946.0 B/s | 53.0 B | 00m00s [ 3/55] Installing cmake-filesystem-0:3 100% | 7.0 MiB/s | 7.1 KiB | 00m00s [ 4/55] Installing libmpc-0:1.3.1-6.fc4 100% | 162.3 MiB/s | 166.2 KiB | 00m00s [ 5/55] Installing python-rpm-macros-0: 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 6/55] Installing python3-rpm-macros-0 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 7/55] Installing zlib-ng-compat-devel 100% | 0.0 B/s | 108.3 KiB | 00m00s [ 8/55] Installing subunit-0:1.4.4-4.fc 100% | 0.0 B/s | 72.9 KiB | 00m00s [ 9/55] Installing make-1:4.4.1-8.fc41. 100% | 300.0 MiB/s | 1.8 MiB | 00m00s [10/55] Installing expat-0:2.6.2-2.fc41 100% | 280.1 MiB/s | 286.8 KiB | 00m00s [11/55] Installing minizip-ng-compat-0: 100% | 155.7 MiB/s | 159.4 KiB | 00m00s [12/55] Installing libsbml-0:5.20.4-1.f 100% | 423.0 MiB/s | 9.7 MiB | 00m00s [13/55] Installing libnuml-0:1.1.4-19.f 100% | 273.0 MiB/s | 279.5 KiB | 00m00s [14/55] Installing check-0:0.15.2-16.fc 100% | 144.2 MiB/s | 147.7 KiB | 00m00s [15/55] Installing subunit-devel-0:1.4. 100% | 0.0 B/s | 6.3 KiB | 00m00s [16/55] Installing pyproject-rpm-macros 100% | 105.1 MiB/s | 107.7 KiB | 00m00s [17/55] Installing cpp-0:14.2.1-1.fc42. 100% | 402.3 MiB/s | 35.0 MiB | 00m00s [18/55] Installing kernel-headers-0:6.1 100% | 233.7 MiB/s | 6.5 MiB | 00m00s [19/55] Installing glibc-headers-x86-0: 100% | 207.8 MiB/s | 2.3 MiB | 00m00s [20/55] Installing libxcrypt-devel-0:4. 100% | 31.8 MiB/s | 32.6 KiB | 00m00s [21/55] Installing glibc-devel-0:2.40-3 100% | 18.7 MiB/s | 38.4 KiB | 00m00s [22/55] Installing gcc-0:14.2.1-1.fc42. 100% | 453.0 MiB/s | 104.2 MiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch [23/55] Installing vim-filesystem-2:9.1 100% | 4.6 MiB/s | 4.7 KiB | 00m00s [24/55] Installing emacs-filesystem-1:3 100% | 265.6 KiB/s | 544.0 B | 00m00s [25/55] Installing tzdata-0:2024a-9.fc4 100% | 66.9 MiB/s | 1.9 MiB | 00m00s [26/55] Installing python-pip-wheel-0:2 100% | 620.8 MiB/s | 1.2 MiB | 00m00s [27/55] Installing mpdecimal-0:2.5.1-16 100% | 201.2 MiB/s | 206.0 KiB | 00m00s [28/55] Installing libb2-0:0.98.1-12.fc 100% | 14.1 MiB/s | 43.3 KiB | 00m00s [29/55] Installing python3-libs-0:3.13. 100% | 369.8 MiB/s | 40.7 MiB | 00m00s [30/55] Installing python3-0:3.13.0~rc1 100% | 0.0 B/s | 33.6 KiB | 00m00s [31/55] Installing cmake-rpm-macros-0:3 100% | 0.0 B/s | 8.1 KiB | 00m00s [32/55] Installing python3-packaging-0: 100% | 211.5 MiB/s | 433.2 KiB | 00m00s [33/55] Installing python3-rpm-generato 100% | 81.0 MiB/s | 82.9 KiB | 00m00s [34/55] Installing annobin-docs-0:12.70 100% | 48.2 MiB/s | 98.8 KiB | 00m00s [35/55] Installing libstdc++-devel-0:14 100% | 420.3 MiB/s | 15.6 MiB | 00m00s [36/55] Installing check-static-0:0.15. 100% | 0.0 B/s | 116.2 KiB | 00m00s [37/55] Installing xerces-c-0:3.2.5-5.f 100% | 447.4 MiB/s | 3.6 MiB | 00m00s [38/55] Installing rhash-0:1.4.4-2.fc41 100% | 173.4 MiB/s | 355.1 KiB | 00m00s [39/55] Installing libuv-1:1.48.0-2.fc4 100% | 268.4 MiB/s | 549.6 KiB | 00m00s [40/55] Installing jsoncpp-0:1.9.5-8.fc 100% | 41.5 MiB/s | 254.9 KiB | 00m00s [41/55] Installing cmake-data-0:3.28.3- 100% | 151.5 MiB/s | 8.5 MiB | 00m00s [42/55] Installing cmake-0:3.28.3-7.fc4 100% | 451.4 MiB/s | 31.6 MiB | 00m00s [43/55] Installing xz-devel-1:5.6.2-2.f 100% | 253.3 MiB/s | 259.4 KiB | 00m00s [44/55] Installing libxml2-devel-0:2.12 100% | 379.6 MiB/s | 3.4 MiB | 00m00s [45/55] Installing libsbml-devel-0:5.20 100% | 547.0 MiB/s | 36.6 MiB | 00m00s [46/55] Installing xerces-c-devel-0:3.2 100% | 323.0 MiB/s | 4.2 MiB | 00m00s [47/55] Installing check-devel-0:0.15.2 100% | 61.8 MiB/s | 126.6 KiB | 00m00s [48/55] Installing gcc-c++-0:14.2.1-1.f 100% | 424.1 MiB/s | 38.2 MiB | 00m00s [49/55] Installing annobin-plugin-gcc-0 100% | 68.9 MiB/s | 987.3 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch [50/55] Installing python3-devel-0:3.13 100% | 201.2 MiB/s | 1.8 MiB | 00m00s [51/55] Installing gcc-plugin-annobin-0 100% | 4.7 MiB/s | 62.7 KiB | 00m00s >>> Running trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch >>> Stop trigger-install scriptlet: redhat-rpm-config-0:294-1.fc42.noarch [52/55] Installing libnuml-devel-0:1.1. 100% | 153.1 MiB/s | 313.6 KiB | 00m00s [53/55] Installing minizip-ng-compat-de 100% | 44.2 MiB/s | 90.5 KiB | 00m00s [54/55] Installing swig-0:4.2.1-8.fc41. 100% | 245.3 MiB/s | 6.1 MiB | 00m00s [55/55] Installing bzip2-devel-0:1.0.8- 100% | 2.2 MiB/s | 310.7 KiB | 00m00s >>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.x86_64 >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.x86_64 Warning: skipped PGP checks for 44 package(s). Finish: build setup for libsedml-2.0.32-13.fc42.src.rpm Start: rpmbuild libsedml-2.0.32-13.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1725235200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.8ABYGu + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + test -d /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/rm -rf /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.I1bRxJ + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd /builddir/build/BUILD/libsedml-2.0.32-build + rm -rf libSEDML-2.0.32 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libSEDML-2.0.32.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-2.0.32 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -e 's| lib/cmake | lib64/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBSBML.cmake + echo 'Patch #0 (libsedml-2.0-fix_install_libpaths.patch):' Patch #0 (libsedml-2.0-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 722 (offset -43 lines). patching file src/bindings/ruby/CMakeLists.txt Hunk #1 succeeded at 128 (offset 12 lines). patching file src/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 96 (offset -30 lines). patching file src/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 118 (offset 5 lines). patching file src/bindings/java/CMakeLists.txt Hunk #1 succeeded at 56 (offset -28 lines). Patch #1 (libsedml-2.0-porting_to_python310.patch): + echo 'Patch #1 (libsedml-2.0-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file src/bindings/python/CMakeLists.txt + echo 'Patch #2 (libsedml-2.0-Fixes-for-swig-4.1.0-macro-definition-correction.patch):' Patch #2 (libsedml-2.0-Fixes-for-swig-4.1.0-macro-definition-correction.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fix_macro_definition --fuzz=0 patching file src/bindings/csharp/CMakeLists.txt patching file src/bindings/java/CMakeLists.txt patching file src/bindings/perl/CMakeLists.txt patching file src/bindings/python/CMakeLists.txt patching file src/bindings/ruby/CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.7iRJpc + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + mkdir -p build + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ pkg-config --cflags libxml-2.0 + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -B build -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.13.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=OFF -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DWITH_GZFILEOP' -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -- The CXX compiler identification is GNU 14.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found LIBSBML: sbml-static (found version "5.20.4") -- Found LIBNUML: numl-static (found version "1.1.4") -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - not found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "4.2.1") -- Found PythonInterp: /usr/bin/python3 (found version "3.13") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.0rc1") -- ---------------------------------------------------------------------- libSEDML version 2.0.32 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 6.5.6-300.fc39.x86_64 host CPU architecture = x86_64 General build flags: CC = CXX = /usr/bin/g++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="2.0.32" -DPACKAGE_NAME="libsedml" CFLAGS = -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread SBML library configuration: SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using Python = /usr/bin/python3 -- Using libcheck = -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done (1.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP CMAKE_SKIP_INSTALL_RPATH CSHARP_COMPILER INCLUDE_INSTALL_DIR LIBSBML_STATIC LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -S/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 -B/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/depend /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/depend /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/build /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o -MF CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o.d -o CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedOperationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o -MF CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o.d -o CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedOperationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -MF CMakeFiles/sedml.dir/common/libsedml-version.cpp.o.d -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o -MF CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o.d -o CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedmlEnumerations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 2%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o -MF CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o.d -o CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/SedmlEnumerations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 4%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -MF CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o.d -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/common/libsedml-version.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 3%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o -MF CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o.d -o CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 3%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAbstractTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAbstractTask.cpp.o -MF CMakeFiles/sedml.dir/SedAbstractTask.cpp.o.d -o CMakeFiles/sedml.dir/SedAbstractTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp: In member function ‘virtual void SedAbstractTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp:508:8: warning: unused variable ‘assigned’ [-Wunused-variable] 508 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 4%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o -MF CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 5%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o -MF CMakeFiles/sedml.dir/SedAddXML.cpp.o.d -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp: In member function ‘virtual void SedAddXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 5%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o -MF CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAdjustableParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 6%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp: In member function ‘virtual void SedAbstractTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAbstractTask.cpp:508:8: warning: unused variable ‘assigned’ [-Wunused-variable] 508 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 7%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -MF CMakeFiles/sedml.dir/SedAlgorithm.cpp.o.d -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 7%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedAddXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp: In member function ‘virtual void SedAddXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAddXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 8%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAnalysis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAnalysis.cpp.o -MF CMakeFiles/sedml.dir/SedAnalysis.cpp.o.d -o CMakeFiles/sedml.dir/SedAnalysis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp: In member function ‘virtual void SedAnalysis::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 7%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -MF CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 9%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAdjustableParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 9%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o -MF CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o.d -o CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAppliedDimension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedAxis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedAxis.cpp.o -MF CMakeFiles/sedml.dir/SedAxis.cpp.o.d -o CMakeFiles/sedml.dir/SedAxis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAxis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -MF CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 11%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedBounds.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedBounds.cpp.o -MF CMakeFiles/sedml.dir/SedBounds.cpp.o.d -o CMakeFiles/sedml.dir/SedBounds.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBounds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 1%] Swig Python source cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../swig/ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../../ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/../../ -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../../sedml -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN= -DLIBSBML_CPP_NAMESPACE_END= -DLIBSBML_CPP_NAMESPACE_QUALIFIER= -DLIBSBML_CPP_NAMESPACE_USE= -DLIBNUML_CPP_NAMESPACE_BEGIN= -DLIBNUML_CPP_NAMESPACE_END= -DLIBNUML_CPP_NAMESPACE_QUALIFIER= -DLIBNUML_CPP_NAMESPACE_USE= -o /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/libsedml.i cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python" -DVERSION="2.0.32" -P /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/add_version.cmake /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/local.i:95: Warning 401: Nothing known about base class 'std::basic_ios< char,std::char_traits< char > >'. Ignored. /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/local.i:95: Warning 401: Maybe you forgot to instantiate 'std::basic_ios< char,std::char_traits< char > >' using %template. Python: patch loader Python: Add Version to generated file Python: create 3.x version make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Built target binding_python_swig make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAlgorithmParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 12%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChange.cpp.o -MF CMakeFiles/sedml.dir/SedChange.cpp.o.d -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 13%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -MF CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o.d -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 13%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o -MF CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp: In member function ‘virtual void SedAnalysis::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAnalysis.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 13%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o -MF CMakeFiles/sedml.dir/SedChangeXML.cpp.o.d -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp: In member function ‘virtual void SedChangeXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 10%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedBase.cpp.o -MF CMakeFiles/sedml.dir/SedBase.cpp.o.d -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1886:8: warning: variable ‘sedmlDeclared’ set but not used [-Wunused-but-set-variable] 1886 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘void SedBase::read(XMLInputStream&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:2206:19: warning: variable ‘position’ set but not used [-Wunused-but-set-variable] 2206 | int position = 0; | ^~~~~~~~ In member function ‘SedBase::setAnnotation(XMLNode*)’, inlined from ‘SedBase::unsetAnnotation()’ at /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1719:23: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:740:36: warning: ‘this’ pointer is null [-Wnonnull] 740 | mAnnotation = annotation->clone(); | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:44: /usr/include/sbml/xml/XMLNode.h: In member function ‘SedBase::unsetAnnotation()’: /usr/include/sbml/xml/XMLNode.h:300:12: note: in a call to non-static member function ‘XMLNode::clone() const’ 300 | XMLNode* clone () const; | ^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 15%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o -MF CMakeFiles/sedml.dir/SedConstructorException.cpp.o.d -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 14%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o -MF CMakeFiles/sedml.dir/SedComputeChange.cpp.o.d -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 15%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o -MF CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAppliedDimension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 16%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o -MF CMakeFiles/sedml.dir/SedDataDescription.cpp.o.d -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 16%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o -MF CMakeFiles/sedml.dir/SedCurve.cpp.o.d -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -MF CMakeFiles/sedml.dir/SedDataGenerator.cpp.o.d -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp: In member function ‘virtual void SedDataGenerator::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp:1192:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1192 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedAxis.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedAxis.cpp.o -MF CMakeFiles/sedml-static.dir/SedAxis.cpp.o.d -o CMakeFiles/sedml-static.dir/SedAxis.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedAxis.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataRange.cpp.o -MF CMakeFiles/sedml.dir/SedDataRange.cpp.o.d -o CMakeFiles/sedml.dir/SedDataRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 17%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o -MF CMakeFiles/sedml.dir/SedDataSet.cpp.o.d -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 20%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedElementFilter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedElementFilter.cpp.o -MF CMakeFiles/sedml.dir/SedElementFilter.cpp.o.d -o CMakeFiles/sedml.dir/SedElementFilter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 18%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o -MF CMakeFiles/sedml.dir/SedDataSource.cpp.o.d -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 21%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o -MF CMakeFiles/sedml.dir/SedErrorLog.cpp.o.d -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 20%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedError.cpp.o -MF CMakeFiles/sedml.dir/SedError.cpp.o.d -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 19%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o -MF CMakeFiles/sedml.dir/SedDocument.cpp.o.d -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp: In member function ‘virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp:3077:8: warning: unused variable ‘assigned’ [-Wunused-variable] 3077 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 22%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFigure.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFigure.cpp.o -MF CMakeFiles/sedml.dir/SedFigure.cpp.o.d -o CMakeFiles/sedml.dir/SedFigure.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp: In member function ‘virtual void SedFigure::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp:972:8: warning: unused variable ‘assigned’ [-Wunused-variable] 972 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 21%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedExperimentReference.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedExperimentReference.cpp.o -MF CMakeFiles/sedml.dir/SedExperimentReference.cpp.o.d -o CMakeFiles/sedml.dir/SedExperimentReference.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedExperimentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 19%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o -MF CMakeFiles/sedml-static.dir/SedBase.cpp.o.d -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1886:8: warning: variable ‘sedmlDeclared’ set but not used [-Wunused-but-set-variable] 1886 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp: In member function ‘void SedBase::read(XMLInputStream&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:2206:19: warning: variable ‘position’ set but not used [-Wunused-but-set-variable] 2206 | int position = 0; | ^~~~~~~~ In member function ‘SedBase::setAnnotation(XMLNode*)’, inlined from ‘SedBase::unsetAnnotation()’ at /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:1719:23: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:740:36: warning: ‘this’ pointer is null [-Wnonnull] 740 | mAnnotation = annotation->clone(); | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBase.cpp:44: /usr/include/sbml/xml/XMLNode.h: In member function ‘SedBase::unsetAnnotation()’: /usr/include/sbml/xml/XMLNode.h:300:12: note: in a call to non-static member function ‘XMLNode::clone() const’ 300 | XMLNode* clone () const; | ^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 22%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFill.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFill.cpp.o -MF CMakeFiles/sedml.dir/SedFill.cpp.o.d -o CMakeFiles/sedml.dir/SedFill.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFill.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 23%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFitExperiment.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFitExperiment.cpp.o -MF CMakeFiles/sedml.dir/SedFitExperiment.cpp.o.d -o CMakeFiles/sedml.dir/SedFitExperiment.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitExperiment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 23%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFitMapping.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFitMapping.cpp.o -MF CMakeFiles/sedml.dir/SedFitMapping.cpp.o.d -o CMakeFiles/sedml.dir/SedFitMapping.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitMapping.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 23%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedBounds.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedBounds.cpp.o -MF CMakeFiles/sedml-static.dir/SedBounds.cpp.o.d -o CMakeFiles/sedml-static.dir/SedBounds.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedBounds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 24%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o -MF CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o.d -o CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp: In member function ‘virtual void SedLeastSquareObjectiveFunction::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp:486:8: warning: unused variable ‘assigned’ [-Wunused-variable] 486 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 24%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -MF CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o.d -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 25%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedLine.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedLine.cpp.o -MF CMakeFiles/sedml.dir/SedLine.cpp.o.d -o CMakeFiles/sedml.dir/SedLine.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLine.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 26%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o -MF CMakeFiles/sedml-static.dir/SedChange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 26%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o -MF CMakeFiles/sedml.dir/SedListOf.cpp.o.d -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAdjustableParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAlgorithmParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 27%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -MF CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeAttribute.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 28%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o -MF CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAppliedDimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 28%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfChanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfChanges.cpp.o -MF CMakeFiles/sedml.dir/SedListOfChanges.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfChanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfChanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 30%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp: In member function ‘virtual void SedChangeXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedChangeXML.cpp:582:8: warning: unused variable ‘assigned’ [-Wunused-variable] 582 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 29%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfCurves.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfCurves.cpp.o -MF CMakeFiles/sedml.dir/SedListOfCurves.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfCurves.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfCurves.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 30%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataDescriptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataGenerators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSets.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 32%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o -MF CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSources.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 31%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -MF CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedComputeChange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 33%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o -MF CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitExperiments.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 32%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o -MF CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfExperimentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 33%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o -MF CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitMappings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 34%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -MF CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o.d -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 34%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfModels.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfModels.cpp.o -MF CMakeFiles/sedml.dir/SedListOfModels.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfModels.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfModels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o -MF CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfOutputs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfParameters.cpp.o -MF CMakeFiles/sedml.dir/SedListOfParameters.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 37%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSimulations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 36%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfRanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfRanges.cpp.o -MF CMakeFiles/sedml.dir/SedListOfRanges.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfRanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfRanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 36%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSetValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 35%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o -MF CMakeFiles/sedml-static.dir/SedCurve.cpp.o.d -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 37%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSlices.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSlices.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSlices.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSlices.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSlices.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 38%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfStyles.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfStyles.cpp.o -MF CMakeFiles/sedml.dir/SedListOfStyles.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfStyles.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 38%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubPlots.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 39%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataDescription.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 40%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSurfaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 40%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o -MF CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfTasks.cpp.o -MF CMakeFiles/sedml.dir/SedListOfTasks.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedListOfVariables.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedListOfVariables.cpp.o -MF CMakeFiles/sedml.dir/SedListOfVariables.cpp.o.d -o CMakeFiles/sedml.dir/SedListOfVariables.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfVariables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 41%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp: In member function ‘virtual void SedDataGenerator::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataGenerator.cpp:1192:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1192 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 42%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedMarker.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedMarker.cpp.o -MF CMakeFiles/sedml.dir/SedMarker.cpp.o.d -o CMakeFiles/sedml.dir/SedMarker.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedMarker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 42%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedModel.cpp.o -MF CMakeFiles/sedml.dir/SedModel.cpp.o.d -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 43%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o -MF CMakeFiles/sedml.dir/SedNamespaces.cpp.o.d -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 44%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedObjective.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedObjective.cpp.o -MF CMakeFiles/sedml.dir/SedObjective.cpp.o.d -o CMakeFiles/sedml.dir/SedObjective.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 44%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 45%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o -MF CMakeFiles/sedml.dir/SedOneStep.cpp.o.d -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp: In member function ‘virtual void SedOneStep::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp:546:8: warning: unused variable ‘assigned’ [-Wunused-variable] 546 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 45%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o -MF CMakeFiles/sedml.dir/SedOutput.cpp.o.d -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp: In member function ‘virtual void SedOutput::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp:521:8: warning: unused variable ‘assigned’ [-Wunused-variable] 521 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 46%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o -MF CMakeFiles/sedml.dir/SedParameter.cpp.o.d -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp: In member function ‘virtual void SedParameter::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp:544:8: warning: unused variable ‘assigned’ [-Wunused-variable] 544 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 46%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataSet.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSet.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 46%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 47%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationResultPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 47%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o -MF CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o.d -o CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp: In member function ‘virtual void SedParameterEstimationTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp:1453:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1453 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot.cpp.o -MF CMakeFiles/sedml.dir/SedPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp: In member function ‘virtual void SedPlot::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp:1225:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1225 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o -MF CMakeFiles/sedml.dir/SedPlot2D.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp: In member function ‘virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp:1084:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1084 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 48%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -MF CMakeFiles/sedml-static.dir/SedDataSource.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDataSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o -MF CMakeFiles/sedml.dir/SedPlot3D.cpp.o.d -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp: In member function ‘virtual void SedPlot3D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp:1083:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1083 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRange.cpp.o -MF CMakeFiles/sedml.dir/SedRange.cpp.o.d -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp: In member function ‘virtual void SedRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp:535:8: warning: unused variable ‘assigned’ [-Wunused-variable] 535 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedReader.cpp.o -MF CMakeFiles/sedml.dir/SedReader.cpp.o.d -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 51%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -MF CMakeFiles/sedml.dir/SedRemoveXML.cpp.o.d -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp: In member function ‘virtual void SedRemoveXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp:456:8: warning: unused variable ‘assigned’ [-Wunused-variable] 456 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 52%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedReport.cpp.o -MF CMakeFiles/sedml.dir/SedReport.cpp.o.d -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp: In member function ‘virtual void SedReport::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp:837:8: warning: unused variable ‘assigned’ [-Wunused-variable] 837 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 50%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o -MF CMakeFiles/sedml-static.dir/SedDocument.cpp.o.d -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp: In member function ‘virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedDocument.cpp:3077:8: warning: unused variable ‘assigned’ [-Wunused-variable] 3077 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 53%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o -MF CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 51%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -MF CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o.d -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 52%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o -MF CMakeFiles/sedml.dir/SedSetValue.cpp.o.d -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 53%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedShadedArea.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedShadedArea.cpp.o -MF CMakeFiles/sedml.dir/SedShadedArea.cpp.o.d -o CMakeFiles/sedml.dir/SedShadedArea.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedShadedArea.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 54%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o -MF CMakeFiles/sedml-static.dir/SedError.cpp.o.d -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 54%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o -MF CMakeFiles/sedml.dir/SedSimulation.cpp.o.d -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp: In member function ‘virtual void SedSimulation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp:881:8: warning: unused variable ‘assigned’ [-Wunused-variable] 881 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 55%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o -MF CMakeFiles/sedml.dir/SedSteadyState.cpp.o.d -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp: In member function ‘virtual void SedSteadyState::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 55%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -MF CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o.d -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 55%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o -MF CMakeFiles/sedml.dir/SedSlice.cpp.o.d -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSlice.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 57%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o -MF CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o.d -o CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedExperimentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 56%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedStyle.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedStyle.cpp.o -MF CMakeFiles/sedml.dir/SedStyle.cpp.o.d -o CMakeFiles/sedml.dir/SedStyle.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 56%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSubPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSubPlot.cpp.o -MF CMakeFiles/sedml.dir/SedSubPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedSubPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFigure.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFigure.cpp.o -MF CMakeFiles/sedml-static.dir/SedFigure.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFigure.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp: In member function ‘virtual void SedFigure::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFigure.cpp:972:8: warning: unused variable ‘assigned’ [-Wunused-variable] 972 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o -MF CMakeFiles/sedml.dir/SedSubTask.cpp.o.d -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 60%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -MF CMakeFiles/sedml.dir/SedTypeCodes.cpp.o.d -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 59%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedTask.cpp.o -MF CMakeFiles/sedml.dir/SedTask.cpp.o.d -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 60%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFill.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFill.cpp.o -MF CMakeFiles/sedml-static.dir/SedFill.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFill.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFill.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 58%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o -MF CMakeFiles/sedml.dir/SedSurface.cpp.o.d -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 61%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o -MF CMakeFiles/sedml.dir/SedUniformRange.cpp.o.d -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 61%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -MF CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o.d -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp: In member function ‘virtual void SedUniformTimeCourse::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp:895:8: warning: unused variable ‘assigned’ [-Wunused-variable] 895 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 61%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o -MF CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitExperiment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 62%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o -MF CMakeFiles/sedml.dir/SedVectorRange.cpp.o.d -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp: In member function ‘virtual void SedVectorRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp:551:8: warning: unused variable ‘assigned’ [-Wunused-variable] 551 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 63%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o -MF CMakeFiles/sedml.dir/SedVisitor.cpp.o.d -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 62%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o -MF CMakeFiles/sedml.dir/SedVariable.cpp.o.d -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 64%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o -MF CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o.d -o CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWaterfallPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 64%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o -MF CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFitMapping.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 65%] Building CXX object src/sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o -MF CMakeFiles/sedml.dir/SedWriter.cpp.o.d -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 65%] Building CXX object src/sedml/CMakeFiles/sedml.dir/kisaomap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/sedml/CMakeFiles/sedml.dir/kisaomap.cpp.o -MF CMakeFiles/sedml.dir/kisaomap.cpp.o.d -o CMakeFiles/sedml.dir/kisaomap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/kisaomap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 66%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o -MF CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o.d -o CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp: In member function ‘virtual void SedLeastSquareObjectiveFunction::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLeastSquareObjectiveFunction.cpp:486:8: warning: unused variable ‘assigned’ [-Wunused-variable] 486 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 66%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedLine.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedLine.cpp.o -MF CMakeFiles/sedml-static.dir/SedLine.cpp.o.d -o CMakeFiles/sedml-static.dir/SedLine.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedLine.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 65%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedFunctionalRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 68%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOf.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 69%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAlgorithmParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 68%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAdjustableParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 69%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfAppliedDimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 70%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfChanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 70%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfCurves.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 71%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataDescriptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 72%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSets.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 71%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataGenerators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 72%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfDataSources.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 73%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfExperimentReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 73%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitExperiments.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 74%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfFitMappings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 74%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfModels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfOutputs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 75%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfRanges.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 76%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSimulations.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 76%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSetValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 77%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 77%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSlices.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 78%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubPlots.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSurfaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfSubTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 79%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfTasks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 80%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o -MF CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o.d -o CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedListOfVariables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 80%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedMarker.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedMarker.cpp.o -MF CMakeFiles/sedml-static.dir/SedMarker.cpp.o.d -o CMakeFiles/sedml-static.dir/SedMarker.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedMarker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 81%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -MF CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o.d -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 81%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o -MF CMakeFiles/sedml-static.dir/SedModel.cpp.o.d -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedModel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 82%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedObjective.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedObjective.cpp.o -MF CMakeFiles/sedml-static.dir/SedObjective.cpp.o.d -o CMakeFiles/sedml-static.dir/SedObjective.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 82%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -MF CMakeFiles/sedml-static.dir/SedOneStep.cpp.o.d -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp: In member function ‘virtual void SedOneStep::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOneStep.cpp:546:8: warning: unused variable ‘assigned’ [-Wunused-variable] 546 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 83%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o -MF CMakeFiles/sedml-static.dir/SedOutput.cpp.o.d -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp: In member function ‘virtual void SedOutput::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedOutput.cpp:521:8: warning: unused variable ‘assigned’ [-Wunused-variable] 521 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 83%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp: In member function ‘virtual void SedParameter::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameter.cpp:544:8: warning: unused variable ‘assigned’ [-Wunused-variable] 544 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 84%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationReport.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 84%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationResultPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 85%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp: In member function ‘virtual void SedParameterEstimationTask::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedParameterEstimationTask.cpp:1453:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1453 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 85%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp: In member function ‘virtual void SedPlot::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot.cpp:1225:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1225 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 86%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp: In member function ‘virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot2D.cpp:1084:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1084 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 86%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -MF CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o.d -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp: In member function ‘virtual void SedPlot3D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedPlot3D.cpp:1083:8: warning: unused variable ‘assigned’ [-Wunused-variable] 1083 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp: In member function ‘virtual void SedRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRange.cpp:535:8: warning: unused variable ‘assigned’ [-Wunused-variable] 535 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o -MF CMakeFiles/sedml-static.dir/SedReader.cpp.o.d -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 87%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -MF CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp: In member function ‘virtual void SedRemoveXML::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRemoveXML.cpp:456:8: warning: unused variable ‘assigned’ [-Wunused-variable] 456 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 88%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o -MF CMakeFiles/sedml-static.dir/SedReport.cpp.o.d -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp: In member function ‘virtual void SedReport::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedReport.cpp:837:8: warning: unused variable ‘assigned’ [-Wunused-variable] 837 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 88%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedRepeatedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 89%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -MF CMakeFiles/sedml-static.dir/SedSetValue.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 89%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o -MF CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o.d -o CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedShadedArea.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 90%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -MF CMakeFiles/sedml-static.dir/SedSimulation.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp: In member function ‘virtual void SedSimulation::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSimulation.cpp:881:8: warning: unused variable ‘assigned’ [-Wunused-variable] 881 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 91%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -MF CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp: In member function ‘virtual void SedSteadyState::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSteadyState.cpp:458:8: warning: unused variable ‘assigned’ [-Wunused-variable] 458 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 90%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o -MF CMakeFiles/sedml-static.dir/SedSlice.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSlice.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 91%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedStyle.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedStyle.cpp.o -MF CMakeFiles/sedml-static.dir/SedStyle.cpp.o.d -o CMakeFiles/sedml-static.dir/SedStyle.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 92%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 92%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedSubTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSubTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 94%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -MF CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o.d -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 93%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o -MF CMakeFiles/sedml-static.dir/SedTask.cpp.o.d -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedTask.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 93%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o -MF CMakeFiles/sedml-static.dir/SedSurface.cpp.o.d -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedSurface.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 94%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformRange.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 95%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -MF CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o.d -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp: In member function ‘virtual void SedUniformTimeCourse::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedUniformTimeCourse.cpp:895:8: warning: unused variable ‘assigned’ [-Wunused-variable] 895 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 96%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -MF CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp: In member function ‘virtual void SedVectorRange::readAttributes(const XMLAttributes&, const ExpectedAttributes&)’: /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVectorRange.cpp:551:8: warning: unused variable ‘assigned’ [-Wunused-variable] 551 | bool assigned = false; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 96%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -MF CMakeFiles/sedml-static.dir/SedVisitor.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 95%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o -MF CMakeFiles/sedml-static.dir/SedVariable.cpp.o.d -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o -MF CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o.d -o CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWaterfallPlot.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o -MF CMakeFiles/sedml-static.dir/SedWriter.cpp.o.d -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/SedWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Building CXX object src/sedml/CMakeFiles/sedml-static.dir/kisaomap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT src/sedml/CMakeFiles/sedml-static.dir/kisaomap.cpp.o -MF CMakeFiles/sedml-static.dir/kisaomap.cpp.o.d -o CMakeFiles/sedml-static.dir/kisaomap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml/kisaomap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a "CMakeFiles/sedml-static.dir/common/SedOperationReturnValues.cpp.o" "CMakeFiles/sedml-static.dir/common/SedmlEnumerations.cpp.o" "CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o" "CMakeFiles/sedml-static.dir/SedAbstractCurve.cpp.o" "CMakeFiles/sedml-static.dir/SedAbstractTask.cpp.o" "CMakeFiles/sedml-static.dir/SedAddXML.cpp.o" "CMakeFiles/sedml-static.dir/SedAdjustableParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o" "CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedAnalysis.cpp.o" "CMakeFiles/sedml-static.dir/SedAppliedDimension.cpp.o" "CMakeFiles/sedml-static.dir/SedAxis.cpp.o" "CMakeFiles/sedml-static.dir/SedBase.cpp.o" "CMakeFiles/sedml-static.dir/SedBounds.cpp.o" "CMakeFiles/sedml-static.dir/SedChange.cpp.o" "CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o" "CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o" "CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o" "CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o" "CMakeFiles/sedml-static.dir/SedCurve.cpp.o" "CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o" "CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o" "CMakeFiles/sedml-static.dir/SedDataRange.cpp.o" "CMakeFiles/sedml-static.dir/SedDataSet.cpp.o" "CMakeFiles/sedml-static.dir/SedDataSource.cpp.o" "CMakeFiles/sedml-static.dir/SedDocument.cpp.o" "CMakeFiles/sedml-static.dir/SedElementFilter.cpp.o" "CMakeFiles/sedml-static.dir/SedError.cpp.o" "CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o" "CMakeFiles/sedml-static.dir/SedExperimentReference.cpp.o" "CMakeFiles/sedml-static.dir/SedFigure.cpp.o" "CMakeFiles/sedml-static.dir/SedFill.cpp.o" "CMakeFiles/sedml-static.dir/SedFitExperiment.cpp.o" "CMakeFiles/sedml-static.dir/SedFitMapping.cpp.o" "CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o" "CMakeFiles/sedml-static.dir/SedLeastSquareObjectiveFunction.cpp.o" "CMakeFiles/sedml-static.dir/SedLine.cpp.o" "CMakeFiles/sedml-static.dir/SedListOf.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAdjustableParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAlgorithmParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfAppliedDimensions.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfChanges.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfCurves.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataDescriptions.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataGenerators.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataSets.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfDataSources.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfExperimentReferences.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfFitExperiments.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfFitMappings.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfModels.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfOutputs.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfParameters.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfRanges.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSetValues.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSimulations.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSlices.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfStyles.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSubPlots.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSubTasks.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfSurfaces.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfTasks.cpp.o" "CMakeFiles/sedml-static.dir/SedListOfVariables.cpp.o" "CMakeFiles/sedml-static.dir/SedMarker.cpp.o" "CMakeFiles/sedml-static.dir/SedModel.cpp.o" "CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o" "CMakeFiles/sedml-static.dir/SedObjective.cpp.o" "CMakeFiles/sedml-static.dir/SedOneStep.cpp.o" "CMakeFiles/sedml-static.dir/SedOutput.cpp.o" "CMakeFiles/sedml-static.dir/SedParameter.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationReport.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationResultPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedParameterEstimationTask.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o" "CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o" "CMakeFiles/sedml-static.dir/SedRange.cpp.o" "CMakeFiles/sedml-static.dir/SedReader.cpp.o" "CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o" "CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o" "CMakeFiles/sedml-static.dir/SedReport.cpp.o" "CMakeFiles/sedml-static.dir/SedSetValue.cpp.o" "CMakeFiles/sedml-static.dir/SedShadedArea.cpp.o" "CMakeFiles/sedml-static.dir/SedSimulation.cpp.o" "CMakeFiles/sedml-static.dir/SedSlice.cpp.o" "CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o" "CMakeFiles/sedml-static.dir/SedStyle.cpp.o" "CMakeFiles/sedml-static.dir/SedSubPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedSubTask.cpp.o" "CMakeFiles/sedml-static.dir/SedSurface.cpp.o" "CMakeFiles/sedml-static.dir/SedTask.cpp.o" "CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o" "CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o" "CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o" "CMakeFiles/sedml-static.dir/SedVariable.cpp.o" "CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o" "CMakeFiles/sedml-static.dir/SedVisitor.cpp.o" "CMakeFiles/sedml-static.dir/SedWaterfallPlot.cpp.o" "CMakeFiles/sedml-static.dir/SedWriter.cpp.o" "CMakeFiles/sedml-static.dir/kisaomap.cpp.o" /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target sedml-static make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 67%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread -shared -Wl,-soname,libsedml.so.2 -o libsedml.so.2.0.32 CMakeFiles/sedml.dir/common/SedOperationReturnValues.cpp.o CMakeFiles/sedml.dir/common/SedmlEnumerations.cpp.o "CMakeFiles/sedml.dir/common/libsedml-version.cpp.o" CMakeFiles/sedml.dir/SedAbstractCurve.cpp.o CMakeFiles/sedml.dir/SedAbstractTask.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAdjustableParameter.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedAnalysis.cpp.o CMakeFiles/sedml.dir/SedAppliedDimension.cpp.o CMakeFiles/sedml.dir/SedAxis.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedBounds.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataRange.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedElementFilter.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedExperimentReference.cpp.o CMakeFiles/sedml.dir/SedFigure.cpp.o CMakeFiles/sedml.dir/SedFill.cpp.o CMakeFiles/sedml.dir/SedFitExperiment.cpp.o CMakeFiles/sedml.dir/SedFitMapping.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedLeastSquareObjectiveFunction.cpp.o CMakeFiles/sedml.dir/SedLine.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedListOfAdjustableParameters.cpp.o CMakeFiles/sedml.dir/SedListOfAlgorithmParameters.cpp.o CMakeFiles/sedml.dir/SedListOfAppliedDimensions.cpp.o CMakeFiles/sedml.dir/SedListOfChanges.cpp.o CMakeFiles/sedml.dir/SedListOfCurves.cpp.o CMakeFiles/sedml.dir/SedListOfDataDescriptions.cpp.o CMakeFiles/sedml.dir/SedListOfDataGenerators.cpp.o CMakeFiles/sedml.dir/SedListOfDataSets.cpp.o CMakeFiles/sedml.dir/SedListOfDataSources.cpp.o CMakeFiles/sedml.dir/SedListOfExperimentReferences.cpp.o CMakeFiles/sedml.dir/SedListOfFitExperiments.cpp.o CMakeFiles/sedml.dir/SedListOfFitMappings.cpp.o CMakeFiles/sedml.dir/SedListOfModels.cpp.o CMakeFiles/sedml.dir/SedListOfOutputs.cpp.o CMakeFiles/sedml.dir/SedListOfParameters.cpp.o CMakeFiles/sedml.dir/SedListOfRanges.cpp.o CMakeFiles/sedml.dir/SedListOfSetValues.cpp.o CMakeFiles/sedml.dir/SedListOfSimulations.cpp.o CMakeFiles/sedml.dir/SedListOfSlices.cpp.o CMakeFiles/sedml.dir/SedListOfStyles.cpp.o CMakeFiles/sedml.dir/SedListOfSubPlots.cpp.o CMakeFiles/sedml.dir/SedListOfSubTasks.cpp.o CMakeFiles/sedml.dir/SedListOfSurfaces.cpp.o CMakeFiles/sedml.dir/SedListOfTasks.cpp.o CMakeFiles/sedml.dir/SedListOfVariables.cpp.o CMakeFiles/sedml.dir/SedMarker.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedObjective.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationReport.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationResultPlot.cpp.o CMakeFiles/sedml.dir/SedParameterEstimationTask.cpp.o CMakeFiles/sedml.dir/SedPlot.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedShadedArea.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedStyle.cpp.o CMakeFiles/sedml.dir/SedSubPlot.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWaterfallPlot.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o CMakeFiles/sedml.dir/kisaomap.cpp.o /lib64/libnuml.so /usr/lib64/libsbml.so -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.2.0.32 libsedml.so.2 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 99%] Built target sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 99%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/common -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o -MF CMakeFiles/test_sedml.dir/TestIssues.cpp.o.d -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/TestIssues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 99%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DUSE_ZLIB -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/common -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -MD -MT tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o -MF CMakeFiles/test_sedml.dir/TestRunner.cpp.o.d -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests/TestRunner.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../src/sedml/libsedml-static.a -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /lib64/libnuml.so /usr/lib64/libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Building CXX object src/bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"2.0.32\" -DSWIG_DIRECTOR_NO_UEH -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/../.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../.. -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python -I/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python/../swig -I/usr/include/python3.13 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -std=c++11 -fPIC -MD -MT src/bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -MF CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o.d -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/libsedml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -DWITH_GZFILEOP -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /lib64/libnuml.so /usr/lib64/libsbml.so -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.UE3ZRl + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + '[' /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT ++ dirname /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT + mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build + mkdir /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + /usr/bin/make install DESTDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -S/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 -B/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml.dir/build.make src/sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 49%] Built target sedml /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/sedml/CMakeFiles/sedml-static.dir/build.make src/sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 97%] Built target sedml-static /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target binding_python_swig /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [ 98%] Built target binding_python_lib /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' cd /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/cmake/Modules/FindLIBSEDML.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/SedOperationReturnValues.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/SedmlEnumerations.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/common.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/extern.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/libsedml-config.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/sedmlfwd.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAbstractCurve.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAbstractTask.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAddXML.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAdjustableParameter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAlgorithm.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAlgorithmParameter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAnalysis.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAppliedDimension.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedAxis.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedBase.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedBounds.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChangeAttribute.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedChangeXML.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedComputeChange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedConstructorException.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedCurve.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataDescription.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataGenerator.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataRange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataSet.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDataSource.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedDocument.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedElementFilter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedError.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedErrorLog.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedErrorTable.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedExperimentReference.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedFigure.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedFill.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedFitExperiment.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedFitMapping.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedFunctionalRange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedLeastSquareObjectiveFunction.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedLine.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOf.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfAdjustableParameters.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfAlgorithmParameters.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfAppliedDimensions.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfChanges.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfCurves.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfDataDescriptions.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfDataGenerators.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfDataSets.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfDataSources.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfExperimentReferences.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfFitExperiments.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfFitMappings.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfModels.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfOutputs.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfParameters.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfRanges.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSetValues.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSimulations.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSlices.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfStyles.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSubPlots.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSubTasks.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfSurfaces.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfTasks.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedListOfVariables.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedMarker.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedModel.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedNamespaces.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedObjective.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedOneStep.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedOutput.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedParameter.h -- Installing: 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/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedRepeatedTask.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedReport.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSetValue.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedShadedArea.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSimulation.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSlice.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSteadyState.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedStyle.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSubPlot.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSubTask.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedSurface.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedTask.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedTypeCodes.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedTypes.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedUniformRange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedUniformTimeCourse.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedVariable.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedVectorRange.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedVisitor.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedWaterfallPlot.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/SedWriter.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/libsedml-version.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/libsedml-config-common.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/include/sedml/common/libsedml-namespace.h -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml.so.2.0.32 -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml.so.2 -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml.so -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-targets.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-targets-release.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-config.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-config-version.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml-static.a -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-static-targets.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-static-targets-release.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-static-config.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/cmake/sedml-static-config-version.cmake -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsedml/_libsedml.so -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsedml.pth -- Installing: /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsedml/libsedml.py make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' + mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/libsedml + find /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT -name '*.la' -delete + rm -rf /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/cmake + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.0.32-13.fc42 --unique-debug-suffix -2.0.32-13.fc42.x86_64 --unique-debug-src-base libsedml-2.0.32-13.fc42.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/libsedml-2.0.32-13.fc42.x86_64 21379 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/libsedml-version.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/common.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/SedmlEnumerations.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/SedmlEnumerations.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/SedOperationReturnValues.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/common/SedOperationReturnValues.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedWriter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedWriter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedVectorRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedVectorRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedVariable.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedVariable.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedUniformTimeCourse.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedUniformTimeCourse.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedUniformRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedUniformRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSubTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSubTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSubPlot.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSubPlot.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedStyle.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedStyle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSteadyState.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSteadyState.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSimulation.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSimulation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedShadedArea.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedShadedArea.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSetValue.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedSetValue.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedReport.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedReport.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRepeatedTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRepeatedTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRemoveXML.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRemoveXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedReader.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedReader.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedPlot3D.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedPlot3D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedPlot2D.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedPlot2D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedParameterEstimationTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedParameterEstimationTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedParameter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedOneStep.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedOneStep.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedObjective.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedObjective.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedNamespaces.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedNamespaces.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedModel.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedMarker.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedMarker.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfVariables.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfVariables.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfTasks.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfTasks.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSurfaces.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSubTasks.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSubPlots.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSubPlots.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfStyles.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfStyles.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSlices.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSlices.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSimulations.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSimulations.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSetValues.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfSetValues.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfRanges.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfRanges.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfModels.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfModels.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfFitExperiments.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfFitExperiments.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfExperimentReferences.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfExperimentReferences.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataSources.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataSources.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataSets.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataSets.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataGenerators.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataGenerators.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataDescriptions.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfDataDescriptions.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfCurves.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfChanges.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfChanges.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfAlgorithmParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfAlgorithmParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfAdjustableParameters.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOfAdjustableParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOf.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedListOf.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedLine.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedLine.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedLeastSquareObjectiveFunction.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedLeastSquareObjectiveFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFunctionalRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFunctionalRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFill.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFill.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFigure.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedFigure.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedExperimentReference.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedExperimentReference.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataSource.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataSource.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataSet.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataSet.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataRange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataRange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataGenerator.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataGenerator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataDescription.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedDataDescription.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedCurve.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedCurve.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedConstructorException.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedConstructorException.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedComputeChange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedComputeChange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChangeXML.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChangeXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChangeAttribute.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChangeAttribute.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChange.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedChange.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAxis.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAxis.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAlgorithmParameter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAlgorithmParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAlgorithm.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAlgorithm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAdjustableParameter.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAdjustableParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAddXML.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAddXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAbstractTask.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAbstractTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAbstractCurve.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/sedml/SedAbstractCurve.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/bindings/swig/ListWrapper.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/src/bindings/python/local.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/libsedml-2.0.32-13.fc42.x86_64/build/src/sedml/common/libsedml-version.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/libsedml-static.a: replacing with normalized version /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/lib64/python3.13/site-packages/libsedml/__pycache__/libsedml.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 36 directories and 334 files, processed 2 inodes, 2 modified (1 replaced + 1 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/libsedml-2.0.32-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.G3rMyj + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libSEDML-2.0.32 + make test -C build make: Entering directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build Start 1: test_sedml_run 1/1 Test #1: test_sedml_run ................... Passed 0.02 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.02 sec make: Leaving directory '/builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/build' + RPM_EC=0 ++ jobs -p + exit 0 Processing files: libsedml-2.0.32-13.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.nWIGYs + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.d9WXBv + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsedml = 2:2.0.32-13.fc42 libsedml(x86-64) = 2:2.0.32-13.fc42 libsedml.so.2()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: R-SEDML < 2:2.0.32-1 java-SEDML < 2:2.0.32-1 libsedml-sharp < 2:2.0.32-1 octave-SEDML < 2:2.0.32-1 perl-SEDML < 2:2.0.32-1 python2-libsedml < 2:2.0.32-1 ruby-SEDML < 2:2.0.32-1 Processing files: libsedml-devel-2.0.32-13.fc42.x86_64 Provides: libsedml-devel = 2:2.0.32-13.fc42 libsedml-devel(x86-64) = 2:2.0.32-13.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsedml.so.2()(64bit) Processing files: libsedml-static-2.0.32-13.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.NRkCA1 + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.aG4TM2 + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsedml-static = 2:2.0.32-13.fc42 libsedml-static(x86-64) = 2:2.0.32-13.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-libsedml-2.0.32-13.fc42.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.PBVg5V + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + DOCDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/NEWS.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/README.md /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/doc/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.yY2CTJ + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + cd libSEDML-2.0.32 + LICENSEDIR=/builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + cp -pr /builddir/build/BUILD/libsedml-2.0.32-build/libSEDML-2.0.32/LICENSE.txt /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT/usr/share/licenses/libsedml + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-libsedml = 2:2.0.32-13.fc42 python3-libsedml = 2:2.0.32-13.fc42 python3-libsedml(x86-64) = 2:2.0.32-13.fc42 python3.13-libsedml = 2:2.0.32-13.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Obsoletes: python-libsedml < 2:2.0.32-13.fc42 Processing files: libsedml-debugsource-2.0.32-13.fc42.x86_64 Provides: libsedml-debugsource = 2:2.0.32-13.fc42 libsedml-debugsource(x86-64) = 2:2.0.32-13.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsedml-debuginfo-2.0.32-13.fc42.x86_64 Provides: debuginfo(build-id) = a89e63c90b82e9a3a418ae2f567a9255813c5c10 libsedml-debuginfo = 2:2.0.32-13.fc42 libsedml-debuginfo(x86-64) = 2:2.0.32-13.fc42 libsedml.so.2.0.32-2.0.32-13.fc42.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-64) = 2:2.0.32-13.fc42 Processing files: python3-libsedml-debuginfo-2.0.32-13.fc42.x86_64 Provides: debuginfo(build-id) = 70c456fb83a5ce59063b8f9b4acc56c7924cf46c python-libsedml-debuginfo = 2:2.0.32-13.fc42 python3-libsedml-debuginfo = 2:2.0.32-13.fc42 python3-libsedml-debuginfo(x86-64) = 2:2.0.32-13.fc42 python3.13-libsedml-debuginfo = 2:2.0.32-13.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(x86-64) = 2:2.0.32-13.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/libsedml-2.0.32-build/BUILDROOT Wrote: /builddir/build/RPMS/python3-libsedml-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-debuginfo-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-devel-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-static-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/libsedml-debugsource-2.0.32-13.fc42.x86_64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-debuginfo-2.0.32-13.fc42.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.BtiGY4 + umask 022 + cd /builddir/build/BUILD/libsedml-2.0.32-build + test -d /builddir/build/BUILD/libsedml-2.0.32-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/libsedml-2.0.32-build + rm -rf /builddir/build/BUILD/libsedml-2.0.32-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild libsedml-2.0.32-13.fc42.src.rpm Finish: build phase for libsedml-2.0.32-13.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1725273284.553665/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/libsedml-2.0.32-13.fc42.src.rpm) Config(child) 2 minutes 46 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "src" }, { "name": "libsedml-debuginfo", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "libsedml-debugsource", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "python3-libsedml", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "python3-libsedml-debuginfo", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "libsedml-static", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" }, { "name": "libsedml-devel", "epoch": 2, "version": "2.0.32", "release": "13.fc42", "arch": "x86_64" } ] } RPMResults finished