Table of Contents - phenoscaperb-0.1.0 Documentation
Classes and Modules
- Configuration
- FaradayMiddleware
- FaradayMiddleware::RaiseHttpException
- Hash
- Object
- Phenoscape
- Phenoscape::BadGateway
- Phenoscape::BadRequest
- Phenoscape::Error
- Phenoscape::GatewayTimeout
- Phenoscape::Genes
- Phenoscape::InternalServerError
- Phenoscape::NotFound
- Phenoscape::Ontotrace
- Phenoscape::Request
- Phenoscape::ServiceUnavailable
- Phenoscape::Studies
- Phenoscape::Taxa
- Phenoscape::Terms
Methods
- ::affecting_entity_phenotype — Phenoscape::Genes
- ::all_ancestors — Phenoscape::Terms
- ::all_descendants — Phenoscape::Terms
- ::annotations — Phenoscape::Taxa
- ::classification — Phenoscape::Terms
- ::gene — Phenoscape::Genes
- ::label — Phenoscape::Terms
- ::labels — Phenoscape::Terms
- ::least_common_subsumers — Phenoscape::Terms
- ::matrix — Phenoscape::Studies
- ::new — FaradayMiddleware::RaiseHttpException
- ::ontotrace — Phenoscape::Ontotrace
- ::phenotypes — Phenoscape::Studies
- ::query — Phenoscape::Studies
- ::search — Phenoscape::Genes
- ::search — Phenoscape::Terms
- ::search_classes — Phenoscape::Terms
- ::taxa — Phenoscape::Studies
- ::taxon — Phenoscape::Taxa
- ::taxon_with_rank — Phenoscape::Taxa
- ::term — Phenoscape::Terms
- ::with_phenotype — Phenoscape::Taxa
- #call — FaradayMiddleware::RaiseHttpException
- #check_data — Object
- #configuration — Configuration
- #define_class_method — Configuration
- #define_setting — Configuration
- #error_body — FaradayMiddleware::RaiseHttpException
- #error_message_400 — FaradayMiddleware::RaiseHttpException
- #error_message_500 — FaradayMiddleware::RaiseHttpException
- #is_json? — FaradayMiddleware::RaiseHttpException
- #len2 — Object
- #make_ua — Object
- #stop — Object
- #tostrings — Hash
- #tosymbols — Hash