class ProtXMLToGFFTool::CDSInfo
Attributes
coding_sequences[RW]
end[RW]
fasta_id[RW]
frame[RW]
gene_id[RW]
is_sixframe[RW]
name[RW]
scaffold[RW]
start[RW]
strand[RW]
Public Instance Methods
overlap(candidate_entry)
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# File lib/protk/protxml_to_gff_tool.rb, line 62 def overlap(candidate_entry) return false if candidate_entry.scaffold!=self.scaffold return false if strand!=self.strand return false if candidate_entry.start >= self.end return false if self.start <= candidate_entry.end return true end