class RayyanScrapers::PubMedScraper
Public Class Methods
client_tool_email()
click to toggle source
# File lib/rayyan-scrapers/pub_med_scraper.rb, line 40 def self.client_tool_email ENV['PUBMED_CLIENT_TOOL_EMAIL'] end
client_tool_name()
click to toggle source
# File lib/rayyan-scrapers/pub_med_scraper.rb, line 36 def self.client_tool_name ENV['PUBMED_CLIENT_TOOL_NAME'] end
max_pages_to_scrape()
click to toggle source
# File lib/rayyan-scrapers/pub_med_scraper.rb, line 28 def self.max_pages_to_scrape (ENV['PUBMED_MAX_PAGES'] || '10').to_i end
new(logger = nil, moneta_options = nil)
click to toggle source
Calls superclass method
# File lib/rayyan-scrapers/pub_med_scraper.rb, line 3 def initialize(logger = nil, moneta_options = nil) super(logger, moneta_options) additional_params = "tool=#{self.class.client_tool_name}&email=#{self.class.client_tool_email}" @logger.debug "PubMedScraper configured with client tool information: #{additional_params}" @base_url = 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils' @search_url = "#{@base_url}/esearch.fcgi?db=pubmed&#{additional_params}" @detail_url = "#{@base_url}/efetch.fcgi?db=pubmed&retmode=xml&#{additional_params}" @detail_friendly_url = "https://www.ncbi.nlm.nih.gov/pubmed/" @refs_url = "#{@base_url}/elink.fcgi?dbfrom=pubmed&db=pubmed&#{additional_params}" @refs_link_name = "pubmed_pubmed_refs" @cited_link_name = "pubmed_pubmed_citedin" @xml_idtype = 'pubmed' @db_idtype = 'pmid' @xml_element_data = 'PubmedData' @xml_element_citation = 'MedlineCitation' @xml_element_bookdata = 'PubmedBookData' @xml_element_root = 'PubmedArticleSet' @xml_element_root_article = 'PubmedArticle' @xml_element_root_book = 'PubmedBookArticle' end
results_per_page()
click to toggle source
# File lib/rayyan-scrapers/pub_med_scraper.rb, line 32 def self.results_per_page (ENV['PUBMED_RESULTS_PER_PAGE'] || '100').to_i end