Table of Contents - mspire-simulator-0.3.2 Documentation
Pages
Classes and Modules
- CurveFit
- Enumerable
- Fit_plot
- GenCurvefit
- MS
- MS::Noise
- MS::Peptide
- MS::Rtgenerator
- MS::Sim_Digester
- MS::Sim_Feature
- MS::Sim_Spectra
- MS::Tcsv_file_writer
- MS::Troll
- MS::Txml_file_writer
- MS::Weka
- Merger
- Modifications
- Mzml_Wrapper
- Mzml_reader
- Object
- Progress
- RThelper
- String
Methods
- ::get_data — Mzml_reader
- ::get_parameters — CurveFit
- ::int_value — Merger
- ::merge — Merger
- ::mz_value — Merger
- ::new — GenCurvefit
- ::new — Mzml_Wrapper
- ::new — MS::Sim_Digester
- ::new — MS::Sim_Feature
- ::new — Modifications
- ::new — MS::Peptide
- ::new — MS::Sim_Spectra
- ::new — MS::Troll
- ::new — Progress
- ::normalize — GenCurvefit
- ::plot — Fit_plot
- ::r_times — MS::Sim_Spectra
- ::smoothave — GenCurvefit
- ::w_avg — Merger
- ::write — MS::Txml_file_writer
- ::write — MS::Tcsv_file_writer
- #RandomFloat — RThelper
- #calcSpectrum — MS::Peptide
- #calc_PI — Object
- #charge_at_pH — Object
- #countAtoms — MS::Peptide
- #create_digested — MS::Sim_Digester
- #digest — MS::Sim_Digester
- #distribution_from_charge — Object
- #finish! — Progress
- #fit — GenCurvefit
- #fitness — GenCurvefit
- #gaussian — RThelper
- #generateRT — MS::Rtgenerator
- #get — MS::Troll
- #getInts — MS::Sim_Feature
- #get_mods — Modifications
- #identify_potential_charges — Object
- #init_population — GenCurvefit
- #make_int_arff — MS::Weka
- #make_rt_arff — MS::Weka
- #mean — Enumerable
- #mutate — GenCurvefit
- #noiseify — MS::Sim_Spectra
- #noiseify — MS::Noise
- #normalized_gaussian — RThelper
- #out — Object
- #plot — GenCurvefit
- #predict_ints — MS::Weka
- #predict_rts — MS::Weka
- #progress — Progress
- #putsv — Object
- #random_float — GenCurvefit
- #rmsd — GenCurvefit
- #sample_variance — Enumerable
- #set_fit_function — GenCurvefit
- #sort_by_fitness — GenCurvefit
- #spec_drops — MS::Noise
- #standard_deviation — Enumerable
- #sum — Enumerable
- #to_xml — Mzml_Wrapper
- #update — Progress