Table of Contents - rput-0.2.1 Documentation
Pages
Classes and Modules
Methods
- ::new — CycleController
- ::new — TreeBunchStarter
- #add_update — TreeBunchStarter
- #append_to_file — TreeBunchStarter
- #check_options — TreeBunchStarter
- #generate_ML_trees — TreeBunchStarter
- #generate_initial_bunch — TreeBunchStarter
- #generate_parsimony_trees — TreeBunchStarter
- #logput — TreeBunchStarter
- #parsimonator_requirements — CycleController
- #raxmllight_requirements — CycleController
- #ready? — TreeBunchStarter
- #run_as_batch — CycleController
- #score_ML_trees — TreeBunchStarter
- #search_std — TreeBunchStarter
- #update_parsimony_trees — TreeBunchStarter